Pre_GI: BLASTN Hits

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Query: NC_011770:4542183 Pseudomonas aeruginosa LESB58, complete genome

Start: 4542183, End: 4569160, Length: 26978

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008463:43421194342119436920327085Pseudomonas aeruginosa UCBPP-PA14, complete genome026080BLASTN svgBLASTP svg
NC_002516:77678777678780223925453Pseudomonas aeruginosa PAO1, complete genome01935BLASTN svgBLASTP svg
NC_008463:17564341756434177764821215Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-83317BLASTN svgBLASTP svg
NC_009439:2337024*2337024236235425331Pseudomonas mendocina ymp, complete genome7e-66260BLASTN svgBLASTP svg
NC_015410:3502099*3502099352815926061Pseudomonas mendocina NK-01 chromosome, complete genome3e-65258BLASTN svgBLASTP svg
NC_015410:1202370*1202370122824825879Pseudomonas mendocina NK-01 chromosome, complete genome1e-58236BLASTN svgBLASTP svg
NC_015410:2838132*2838132286405125920Pseudomonas mendocina NK-01 chromosome, complete genome6e-51210BLASTN svgBLASTP svg
NC_015410:1324313*1324313135087526563Pseudomonas mendocina NK-01 chromosome, complete genome1e-48202BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome3e-40174BLASTN svgBLASTP svg
NC_008825:564392*56439259156627175Methylibium petroleiphilum PM1, complete genome3e-37165BLASTN svgBLASTP svg
NC_007951:4608560*4608560463659128032Burkholderia xenovorans LB400 chromosome 1, complete sequence1e-36163BLASTN svgBLASTP svg
NC_009648:1541699*1541699160010958411Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome3e-25125BLASTN svgBLASTP svg
NC_007510:33400083340008337541735410Burkholderia sp. 383 chromosome 1, complete sequence4e-21111BLASTN svgBLASTP svg
NC_009439:1174432*1174432119973625305Pseudomonas mendocina ymp, complete genome9e-19103BLASTN svgBLASTP svg
NC_009092:2282437*2282437232744145005Shewanella loihica PV-4, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_010505:40095040095042537624427Methylobacterium radiotolerans JCM 2831, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_018868:282738*28273830817025433Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_020063:2449554*2449554247289823345Enterobacteriaceae bacterium strain FGI 57, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_015856:3536441*3536441356339226952Collimonas fungivorans Ter331 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013716:1756545*1756545177694320399Citrobacter rodentium ICC168, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011149:1429523*1429523149808768565Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-0869.9BLASTN svgBLASTP svg
NC_008278:14727091472709149653023822Frankia alni ACN14a, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010172:480000*48000053036650367Methylobacterium extorquens PA1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012814:1465738*1465738148788922152Bifidobacterium animalis subsp. lactis Bl-04, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012815:1465670*1465670148782122152Bifidobacterium animalis subsp. lactis DSM 10140, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014375:1146328*1146328117709930772Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015733:3923800*3923800394679722998Pseudomonas putida S16 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009348:41350024135002416151226511Aeromonas salmonicida subsp. salmonicida A449, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_001263:66266666266668995627291Deinococcus radiodurans R1 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg