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Query: NC_011770:3396637 Pseudomonas aeruginosa LESB58, complete genome

Start: 3396637, End: 3419544, Length: 22908

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008463:31688373168837319814929313Pseudomonas aeruginosa UCBPP-PA14, complete genome09997BLASTN svgBLASTP svg
NC_007492:11936261193626121699723372Pseudomonas fluorescens PfO-1, complete genome1e-48202BLASTN svgBLASTP svg
NC_008313:88624888624891786931622Ralstonia eutropha H16 chromosome 1, complete sequence1e-29139BLASTN svgBLASTP svg
NC_013421:1954915*1954915197410019186Pectobacterium wasabiae WPP163, complete genome1e-23119BLASTN svgBLASTP svg
NC_014323:39763513976351403850962159Herbaspirillum seropedicae SmR1 chromosome, complete genome8e-22113BLASTN svgBLASTP svg
NC_012857:10974001097400112349826099Ralstonia pickettii 12D chromosome 2, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_020063:23438132343813236609922287Enterobacteriaceae bacterium strain FGI 57, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_013093:2230171*2230171225498024810Actinosynnema mirum DSM 43827, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009664:1434974*1434974145788622913Kineococcus radiotolerans SRS30216, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009668:46010460106559919590Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_013169:20450002045000206559920600Kytococcus sedentarius DSM 20547, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012522:32245263224526325956035035Rhodococcus opacus B4, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015145:10452641045264108425238989Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007509:30934830934833693727590Burkholderia sp. 383 chromosome 3, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004129:5723787*5723787575817934393Pseudomonas fluorescens Pf-5, complete genome3e-0661.9BLASTN svgBLASTP svg