Pre_GI: BLASTN Hits

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Query: NC_011770:3049830 Pseudomonas aeruginosa LESB58, complete genome

Start: 3049830, End: 3081314, Length: 31485

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010694:2189652*2189652221918829537Erwinia tasmaniensis, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_004431:27986827986832229542428Escherichia coli CFT073, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_011770:42901429016842125521Pseudomonas aeruginosa LESB58, complete genome07127BLASTN svgBLASTP svg
NC_011770:18118741811874183622424351Pseudomonas aeruginosa LESB58, complete genome04262BLASTN svgBLASTP svg
NC_002516:27501282750128277880428677Pseudomonas aeruginosa PAO1, complete genome022020BLASTN svgBLASTP svg
NC_002516:42914429146861625703Pseudomonas aeruginosa PAO1, complete genome06968BLASTN svgBLASTP svg
NC_008463:28485682848568287992931362Pseudomonas aeruginosa UCBPP-PA14, complete genome022640BLASTN svgBLASTP svg
NC_008463:17564341756434177764821215Pseudomonas aeruginosa UCBPP-PA14, complete genome04218BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-32149BLASTN svgBLASTP svg
NC_008027:4889662*4889662491964529984Pseudomonas entomophila L48, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_004129:17418161741816177185030035Pseudomonas fluorescens Pf-5, complete genome3e-37165BLASTN svgBLASTP svg
NC_004129:195347*19534722067225326Pseudomonas fluorescens Pf-5, complete genome3e-37165BLASTN svgBLASTP svg
NC_012660:165559*16555920054534987Pseudomonas fluorescens SBW25 chromosome, complete genome1e-21113BLASTN svgBLASTP svg
NC_012660:35731543573154359859925446Pseudomonas fluorescens SBW25 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_015556:13043713043716194631510Pseudomonas fulva 12-X chromosome, complete genome4e-40174BLASTN svgBLASTP svg
NC_020209:1847895*1847895187267824784Pseudomonas poae RE*1-1-14, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020209:49437344943734497459930866Pseudomonas poae RE*1-1-14, complete genome2e-20109BLASTN svgBLASTP svg
NC_005773:5149768*5149768521141661649Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_007005:2686551*2686551274062754077Pseudomonas syringae pv. syringae B728a, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_004578:35970833597083362009923017Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_010943:45507324550732457350522774Stenotrophomonas maltophilia K279a, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007508:30656213065621309125825638Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome2e-0869.9BLASTN svgBLASTP svg