Pre_GI: BLASTN Hits

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Query: NC_011770:2804218 Pseudomonas aeruginosa LESB58, complete genome

Start: 2804218, End: 2828838, Length: 24621

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011992:1179084*1179084120383024747Acidovorax ebreus TPSY, complete genome019690BLASTN svgBLASTP svg
NC_011992:12137261213726123279819073Acidovorax ebreus TPSY, complete genome09323BLASTN svgBLASTP svg
NC_008750:12533541253354128321029857Shewanella sp. W3-18-1, complete genome02896BLASTN svgBLASTP svg
NC_021150:18238741823874184285118978Azotobacter vinelandii CA6, complete genome2e-143517BLASTN svgBLASTP svg
NC_012560:18238611823861184283818978Azotobacter vinelandii DJ, complete genome2e-143517BLASTN svgBLASTP svg
NC_011149:36176536176538459922835Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-89337BLASTN svgBLASTP svg
NC_011083:40302240302245026847247Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-88335BLASTN svgBLASTP svg
NC_011080:38344138344140609922659Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-86327BLASTN svgBLASTP svg
NC_010102:27213742721374274466823295Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-84321BLASTN svgBLASTP svg
NC_011887:72364723649735524992Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete7e-81309BLASTN svgBLASTP svg
NC_008344:49039*4903913459985561Nitrosomonas eutropha C91, complete genome4e-70274BLASTN svgBLASTP svg
NC_008027:23972552397255242125624002Pseudomonas entomophila L48, complete genome5e-45190BLASTN svgBLASTP svg
NC_013856:69200069200071990027901Azospirillum sp. B510 plasmid pAB510b, complete sequence6e-32147BLASTN svgBLASTP svg
NC_010002:56919685691968571687324906Delftia acidovorans SPH-1, complete genome4e-27131BLASTN svgBLASTP svg
NC_012660:31799803179980320794927970Pseudomonas fluorescens SBW25 chromosome, complete genome4e-24121BLASTN svgBLASTP svg
NC_014831:19066911906691195238745697Thermaerobacter marianensis DSM 12885 chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_010170:47399254739925476955229628Bordetella petrii, complete genome2e-19105BLASTN svgBLASTP svg
NC_011757:10914861091486111319221707Methylobacterium chloromethanicum CM4, complete genome2e-19105BLASTN svgBLASTP svg
NC_011420:85264385264387609923457Rhodospirillum centenum SW, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_012803:19809551980955200418223228Micrococcus luteus NCTC 2665, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010002:528529*52852955003421506Delftia acidovorans SPH-1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014973:4174668*4174668421021135544Geobacter sp. M18 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_008781:19738261973826199696823143Polaromonas naphthalenivorans CJ2, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009439:91853491853494240823875Pseudomonas mendocina ymp, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_014910:465980*46598050776541786Alicycliphilus denitrificans BC chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015856:30597373059737308304923313Collimonas fungivorans Ter331 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_013441:27888062788806282218133376Gordonia bronchialis DSM 43247, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012856:3615550*3615550364899933450Ralstonia pickettii 12D chromosome 1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010505:26909392690939272152230584Methylobacterium radiotolerans JCM 2831, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002939:30430683043068306461721550Geobacter sulfurreducens PCA, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_008570:3220539*3220539328055660018Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_008752:415599*41559944209126493Acidovorax avenae subsp. citrulli AAC00-1, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_015968:21101752110175212892318749Enterobacter asburiae LF7a chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_010688:32298203229820327221942400Xanthomonas campestris pv. campestris, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_021066:53421275342127536560823482Raoultella ornithinolytica B6, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015424:3112637*3112637318003367397Aeromonas veronii B565 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007951:17112231711223173758426362Burkholderia xenovorans LB400 chromosome 1, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_008010:44965244965246986420213Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_008340:362000*36200038524523246Alkalilimnicola ehrlichei MLHE-1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008782:15661721566172158601319842Acidovorax sp. JS42, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011144:10739441073944109429420351Phenylobacterium zucineum HLK1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013169:47485647485649551820663Kytococcus sedentarius DSM 20547, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007759:2748000*2748000277201124012Syntrophus aciditrophicus SB, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013592:14650151465015148872023706Dickeya dadantii Ech586, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013967:827150*82715085049923350Haloferax volcanii DS2 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015138:30224143022414304672924316Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-1075.8BLASTN svgBLASTP svg
NC_007509:719547195411100139048Burkholderia sp. 383 chromosome 3, complete sequence8e-1073.8BLASTN svgBLASTP svg
NC_013441:27614592761459278449623038Gordonia bronchialis DSM 43247, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013441:45390354539035455886719833Gordonia bronchialis DSM 43247, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015671:25580825580830092445117Cellvibrio gilvus ATCC 13127 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_007384:37417083741708376309921392Shigella sonnei Ss046, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_000913:3624826*3624826366560340778Escherichia coli K12, complete genome3e-0971.9BLASTN svgBLASTP svg
CU928160:37090813709081373009921019Escherichia coli IAI1 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
CU928145:39834323983432403268849257Escherichia coli 55989 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
CP002516:24676724676726745320687Escherichia coli KO11, complete genome3e-0971.9BLASTN svgBLASTP svg
CP002185:38224703822470385930636837Escherichia coli W, complete genome3e-0971.9BLASTN svgBLASTP svg
AP010958:43134624313462433479021329Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-0971.9BLASTN svgBLASTP svg
AC_000091:39768883976888399503018143Escherichia coli W3110 DNA, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007613:34703143470314350909338780Shigella boydii Sb227, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009348:14759551475955153571059756Aeromonas salmonicida subsp. salmonicida A449, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014814:3364336*3364336338651822183Mycobacterium sp. Spyr1 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013201:4500*45002569521196Halomicrobium mukohataei DSM 12286 plasmid pHmuk01, complete3e-0971.9BLASTN svgBLASTP svg
NC_011748:39834323983432403268849257Escherichia coli 55989, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010814:36739833673983369691022928Geobacter lovleyi SZ, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010658:36226103622610364133018721Shigella boydii CDC 3083-94, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010473:37225713722571375929536725Escherichia coli str. K-12 substr. DH10B, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010468:23100023100025334622347Escherichia coli ATCC 8739, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009801:39569173956917397533818422Escherichia coli E24377A, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009800:3685651*3685651370909923449Escherichia coli HS, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002927:2636694*2636694265936422671Bordetella bronchiseptica RB50, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003155:64445006444500646671722218Streptomyces avermitilis MA-4680, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015422:34933963493396351574822353Alicycliphilus denitrificans K601 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_019974:1184871*1184871127279187921Natronococcus occultus SP4, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013169:1058463*1058463108536926907Kytococcus sedentarius DSM 20547, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013172:25565172556517257961323097Brachybacterium faecium DSM 4810, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015671:13989213989216047420583Cellvibrio gilvus ATCC 13127 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015733:59098215909821595513745317Pseudomonas putida S16 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015740:2692023*2692023271734525323Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-0867.9BLASTN svgBLASTP svg
NC_019974:298523*29852332591627394Natronococcus occultus SP4, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003198:37884437884440275223909Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-0765.9BLASTN svgBLASTP svg
NC_004631:2584244*2584244260559921356Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-0765.9BLASTN svgBLASTP svg
NC_009512:59209605920960595518534226Pseudomonas putida F1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012779:2755338*2755338278000524668Edwardsiella ictaluri 93-146, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014151:37088237088239435823477Cellulomonas flavigena DSM 20109 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014151:40213944021394406852347130Cellulomonas flavigena DSM 20109 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015566:1127595*1127595116557137977Serratia sp. AS12 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015567:1127780*1127780116575637977Serratia sp. AS9 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011992:22797522279752232691047159Acidovorax ebreus TPSY, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009767:2866668*2866668289590829241Roseiflexus castenholzii DSM 13941, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009668:52917552917554876219588Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_002939:2337402*2337402239671759316Geobacter sulfurreducens PCA, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_002939:2315402*2315402239364278241Geobacter sulfurreducens PCA, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012796:1049034*10490341180099131066Desulfovibrio magneticus RS-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012808:28862822886282290930323022Methylobacterium extorquens AM1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013859:9500*95003559926100Azospirillum sp. B510 plasmid pAB510e, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_014831:18438351843835188451140677Thermaerobacter marianensis DSM 12885 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015424:32772923277292330051523224Aeromonas veronii B565 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_018691:1293449*1293449131822524777Alcanivorax dieselolei B5 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_019974:1909244*1909244194059931356Natronococcus occultus SP4, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010943:24659762465976248809922124Stenotrophomonas maltophilia K279a, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011894:30900003090000310978319784Methylobacterium nodulans ORS 2060, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012808:92198592198594462922645Methylobacterium extorquens AM1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014121:31889283188928321328724360Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_014210:56836165683616570702223407Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_016002:24539192453919250029546377Pseudogulbenkiania sp. NH8B, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010170:44630004463000451176948770Bordetella petrii, complete genome3e-0661.9BLASTN svgBLASTP svg