Pre_GI: BLASTN Hits

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Query: NC_011770:2046490 Pseudomonas aeruginosa LESB58, complete genome

Start: 2046490, End: 2070503, Length: 24014

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008463:2017607*2017607204360726001Pseudomonas aeruginosa UCBPP-PA14, complete genome016600BLASTN svgBLASTP svg
NC_002516:35190003519000354507426075Pseudomonas aeruginosa PAO1, complete genome03475BLASTN svgBLASTP svg
NC_009439:2038303*2038303206823929937Pseudomonas mendocina ymp, complete genome02097BLASTN svgBLASTP svg
NC_015410:2144387*2144387217909934713Pseudomonas mendocina NK-01 chromosome, complete genome02077BLASTN svgBLASTP svg
NC_008027:1559083*1559083158236923287Pseudomonas entomophila L48, complete genome01887BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome01792BLASTN svgBLASTP svg
NC_015379:1887275*1887275191854531271Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,01457BLASTN svgBLASTP svg
NC_004129:4993974*4993974502072326750Pseudomonas fluorescens Pf-5, complete genome01415BLASTN svgBLASTP svg
NC_020209:997385*997385104138844004Pseudomonas poae RE*1-1-14, complete genome01368BLASTN svgBLASTP svg
NC_012660:1804610*1804610183512430515Pseudomonas fluorescens SBW25 chromosome, complete genome01344BLASTN svgBLASTP svg
NC_018868:569423*56942361904449622Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome5e-159569BLASTN svgBLASTP svg
NC_012997:1446037*1446037147363527599Teredinibacter turnerae T7901, complete genome6e-103383BLASTN svgBLASTP svg
NC_008702:1153344*1153344117844425101Azoarcus sp. BH72, complete genome1e-73285BLASTN svgBLASTP svg
NC_015740:25873232587323260752820206Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete4e-70274BLASTN svgBLASTP svg
NC_007492:45639814563981458949625516Pseudomonas fluorescens PfO-1, complete genome2e-44188BLASTN svgBLASTP svg
NC_021150:15642291564229159503430806Azotobacter vinelandii CA6, complete genome1e-42182BLASTN svgBLASTP svg
NC_014323:4792048*4792048483609944052Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-33153BLASTN svgBLASTP svg
NC_004757:24519192451919247341121493Nitrosomonas europaea ATCC 19718, complete genome9e-25123BLASTN svgBLASTP svg
NC_011662:12116601211660123662824969Thauera sp. MZ1T, complete genome1e-20109BLASTN svgBLASTP svg
NC_005966:69689696899119521507Acinetobacter sp. ADP1, complete genome5e-20107BLASTN svgBLASTP svg
NC_009654:3215205*3215205324567930475Marinomonas sp. MWYL1, complete genome2e-19105BLASTN svgBLASTP svg
NC_018691:1864796*1864796190445339658Alcanivorax dieselolei B5 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_010524:1005355*1005355103237727023Leptothrix cholodnii SP-6, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_008781:2925818*2925818294540419587Polaromonas naphthalenivorans CJ2, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_007348:21151522115152216024045089Ralstonia eutropha JMP134 chromosome 2, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_008260:10154471015447103954324097Alcanivorax borkumensis SK2, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_011146:3720658*3720658375266832011Geobacter bemidjiensis Bem, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010524:33910753391075341365222578Leptothrix cholodnii SP-6, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009720:2489003*2489003251980530803Xanthobacter autotrophicus Py2, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_010170:50877425087742511517327432Bordetella petrii, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_003198:4513900*4513900454590232003Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-1177.8BLASTN svgBLASTP svg
NC_004631:44940004494000451380819809Salmonella enterica subsp. enterica serovar Typhi Ty2, complete5e-1177.8BLASTN svgBLASTP svg
NC_006513:34865583486558351342826871Azoarcus sp. EbN1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011757:97281*9728112674229462Methylobacterium chloromethanicum CM4, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012808:58701*587018490626206Methylobacterium extorquens AM1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014931:5088125*5088125512272134597Variovorax paradoxus EPS chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011566:15977511597751162783830088Shewanella piezotolerans WP3, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007404:974461974461101843943979Thiobacillus denitrificans ATCC 25259, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008314:36500365005712620627Ralstonia eutropha H16 chromosome 2, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_008609:3732192*3732192377050638315Pelobacter propionicus DSM 2379, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014973:1767798*1767798179025122454Geobacter sp. M18 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_020133:24219652421965244809926135Mycobacterium liflandii 128FXT, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_019902:626934*62693464909922166Thioalkalivibrio nitratireducens DSM 14787, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002928:12312612312616356640441Bordetella parapertussis 12822, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002927:11898211898216220243221Bordetella bronchiseptica RB50, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002939:2844240*2844240287693932700Geobacter sulfurreducens PCA, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007298:13348761334876136112026245Dechloromonas aromatica RCB, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007948:41765794176579420490428326Polaromonas sp. JS666, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008781:33029343302934332709924166Polaromonas naphthalenivorans CJ2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015711:6522808*6522808656473541928Myxococcus fulvus HW-1 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014935:17048161704816174171036895Nitratifractor saLSUginis DSM 16511 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008740:29059902905990294863442645Marinobacter aquaeolei VT8, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008380:85524685524689413738892Rhizobium leguminosarum bv. viciae 3841, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012559:2663747*2663747271401150265Laribacter hongkongensis HLHK9, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015424:3112637*3112637318003367397Aeromonas veronii B565 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015578:39804963980496402949649001Treponema primitia ZAS-2 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_019892:3086493*3086493310858222090Singulisphaera acidiphila DSM 18658 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008702:39280433928043395047222430Azoarcus sp. BH72, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007651:16625581662558168442221865Burkholderia thailandensis E264 chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg