Pre_GI: BLASTP Hits

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Query: NC_011770:860944:884141 Pseudomonas aeruginosa LESB58, complete genome

Start: 884141, End: 884443, Length: 303

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017033:1052000:107471510747151075245531Frateuria aurantia DSM 6220 chromosome, complete genomephage DNA packaging protein, Nu1 subunit of terminase8e-1889
NC_016613:2160356:217468121746812175226546Vibrio sp. EJY3 chromosome 1, complete sequenceDNA packaging dimer Putative small subunit2e-1271.2
NC_004431:3040953:304595430459543046499546Escherichia coli CFT073, complete genomeProphage QSR' DNA packaging protein NU1 homolog9e-1062.4
NC_011750:1931384:195572219557221956231510Escherichia coli IAI39 chromosome, complete genomeputative terminase small subunit (DNA packaging protein Nu1) from bacteriophage origin1e-0961.6
NC_011745:2025725:204940720494072049916510Escherichia coli ED1a chromosome, complete genomeputative terminase small subunit (DNA packaging protein Nu1) from bacteriophage origin1e-0961.6
NC_013361:3112023:311570231157023116211510Escherichia coli O26:H11 str. 11368 chromosome, complete genometerminase small subunit1e-0961.6
NC_013941:1963523:198759619875961988105510Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeprophage Qin DNA packaging protein NU1-like protein1e-0961.6
NC_013941:2425233:246190124619012462410510Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeprophage Qin DNA packaging protein NU1-like protein1e-0961.6
NC_013361:2169948:219323121932312193737507Escherichia coli O26:H11 str. 11368 chromosome, complete genometerminase small subunit2e-0961.2
NC_011750:1565000:157677015767701577315546Escherichia coli IAI39 chromosome, complete genomeDNA packaging protein; DLP12 prophage3e-0960.8
CP002185:1770815:177581617758161776361546Escherichia coli W, complete genome3e-0960.8
CU928160:1668842:167384316738431674388546Escherichia coli IAI1 chromosome, complete genomeDNA packaging protein; DLP12 prophage3e-0960.8
NC_011741:1668842:167384316738431674388546Escherichia coli IAI1 chromosome, complete genomeDNA packaging protein; DLP12 prophage3e-0960.8
NC_013941:699286:717986717986718531546Escherichia coli O55:H7 str. CB9615 chromosome, complete genomebacteriophage DNA packaging protein3e-0960.8
NC_000913:558920:580057580057580602546Escherichia coli K12, complete genomeDLP12 prophage; DNA packaging protein2e-0960.8
NC_010473:623810:632649632649633194546Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; DNA packaging protein2e-0960.8
NC_010473:498252:519389519389519934546Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; DNA packaging protein2e-0960.8
AC_000091:558920:580057580057580602546Escherichia coli W3110 DNA, complete genomeDNA packaging protein2e-0960.8
NC_012759:461680:482817482817483362546Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; DNA packaging protein2e-0960.8
NC_002695:2158314:218152621815262182071546Escherichia coli O157:H7 str. Sakai, complete genomeputative terminase small subunit3e-0960.5
NC_007954:3887488:388944538894453889975531Shewanella denitrificans OS217, complete genomephage DNA packaging Nu15e-0959.7
NC_010473:1712984:172344717234471724016570Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; predicted packaging protein5e-0959.7
NC_000913:1625500:163382216338221634391570Escherichia coli K12, complete genomeQin prophage; predicted packaging protein5e-0959.7
AC_000091:1627049:163751216375121638081570Escherichia coli W3110 DNA, complete genomepredicted packaging protein5e-0959.7
CU928145:824367:841600841600842145546Escherichia coli 55989 chromosome, complete genomeDNA packaging protein; DLP12 prophage5e-0959.7
NC_011748:824367:841600841600842145546Escherichia coli 55989, complete genomeDNA packaging protein; DLP12 prophage5e-0959.7
NC_009832:2211154:223551922355192236073555Serratia proteamaculans 568, complete genomeDNA packaging Nu17e-0959.3
NC_020181:2097066:209896320989632099508546Enterobacter aerogenes EA1509E, complete genomeTerminase small subunit1e-0858.5
NC_013941:5317424:532956353295635330111549Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeprophage Qin DNA packaging protein NU1-like protein1e-0858.5
NC_012967:531000:551306551306551881576Escherichia coli B str. REL606 chromosome, complete genomeDNA packaging protein2e-0651.2
NC_012947:3231893:323379832337983234373576Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeDNA packaging Nu12e-0651.2