Pre_GI: BLASTP Hits

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Query: NC_011770:860944:874209 Pseudomonas aeruginosa LESB58, complete genome

Start: 874209, End: 874973, Length: 765

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016845:2274500:228340522834052284115711Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,DNA-binding protein Roi2e-28126
NC_013364:1183000:120081812008181201540723Escherichia coli O111:H- str. 11128, complete genomeputative DNA-binding protein7e-25114
NC_002655:1332961:134955513495551350283729Escherichia coli O157:H7 EDL933, complete genomeputative DNA-binding protein Roi of bacteriophage BP-933W7e-25114
NC_005966:2110549:212319821231982123923726Acinetobacter sp. ADP1, complete genomeputative DNA-binding protein (Roi)4e-24111
NC_017328:303987:322722322722323444723Shigella flexneri 2002017 chromosome, complete genomeDNA-binding protein Roi5e-23108
NC_011415:2153243:215947421594742160181708Escherichia coli SE11 chromosome, complete genomehypothetical protein6e-23107
NC_013361:1558423:157703215770321577754723Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding protein1e-22107
NC_011601:1039500:105684210568421057564723Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding protein1e-22106
NC_008258:269806:293814293814294536723Shigella flexneri 5 str. 8401, complete genomeputative DNA-binding protein Roi of bacteriophage BP-933W3e-22105
NC_004129:4368356:4377096437709643781151020Pseudomonas fluorescens Pf-5, complete genomehypothetical protein3e-21102
NC_015566:3659318:366059336605933661267675Serratia sp. AS12 chromosome, complete genomePhage regulatory protein, Rha-like protein1e-1893.6
NC_013282:1804909:182067518206751821400726Cronobacter turicensis, complete genomehypothetical protein1e-1893.2
NC_009778:959982:982338982338983075738Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1892.8
NC_017047:1906000:191134119113411912000660Rahnella aquatilis HX2 chromosome, complete genomephage antirepressor protein7e-1581.3
NC_009937:958576:972170972170972916747Azorhizobium caulinodans ORS 571, complete genomeputative antirepressor protein1e-0653.5