Pre_GI: BLASTP Hits

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Query: NC_011770:4924127:4958093 Pseudomonas aeruginosa LESB58, complete genome

Start: 4958093, End: 4958827, Length: 735

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009439:2427120:247396224739622474663702Pseudomonas mendocina ymp, complete genomeTraX family protein8e-26117
NC_015379:2751342:276900327690032769347345Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein2e-1893.2
NC_014370:885937:907856907856908497642Prevotella melaninogenica ATCC 25845 chromosome chromosome I,protein TraX4e-0858.5
NC_019968:1147409:115454311545431155190648Prevotella dentalis DSM 3688 chromosome 2, complete sequenceTraX protein3e-0755.5
NC_015949:71474:904529045291156705Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeTraX family protein3e-0755.5
NC_009614:4201098:422663342266334227328696Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein2e-0653.1