Pre_GI: BLASTP Hits

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Query: NC_011770:4542183:4542183 Pseudomonas aeruginosa LESB58, complete genome

Start: 4542183, End: 4543601, Length: 1419

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008463:4342119:4342119434211943435371419Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable amino acid permease0764
NC_009348:2034500:2038628203862820400641437Aeromonas salmonicida subsp. salmonicida A449, complete genomearginine/ornithine antiporter6e-88325
NC_015410:2258800:2258800225880022602271428Pseudomonas mendocina NK-01 chromosome, complete genomearginine/ornithine antiporter5e-85315
NC_020829:5174354:5224533522453352259811449Pseudomonas denitrificans ATCC 13867, complete genomearginine/ornithine antiporter8e-85314
NC_015391:2059191:2059191205919120606181428Carnobacterium sp. 17-4 chromosome, complete genomearginine/ornithine antiporter5e-81301
NC_016641:5808113:5834570583457058359851416Paenibacillus terrae HPL-003 chromosome, complete genomearginine/ornithine antiporter8e-80298
NC_021064:1705961:1716405171640517178861482Propionibacterium avidum 44067, complete genomeArginine/ornithine antiporter ArcD1e-78294
NC_012214:1974500:2006813200681320082071395Erwinia pyrifoliae Ep1/96, complete genomePutative arginine/ornithine antiporter YdgI3e-77289
NC_013971:1927510:1930022193002219314131392Erwinia amylovora ATCC 49946 chromosome, complete genomearginine/ornithine antiporter5e-77288
NC_013961:1891000:1892495189249518938861392Erwinia amylovora, complete genomeputative APA family amino acid transporter5e-77288
NC_014121:4577324:4585647458564745870231377Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeArginine/ornithine antiporter2e-71270
NC_008800:1942000:1947359194735919488611503Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,amino acid permease8e-69261
NC_017093:2357583:2371047237104723724471401Actinoplanes missouriensis 431, complete genomeputative amino acid permease8e-69261
NC_015470:831863:8362268362268376861461Chlamydophila psittaci 6BC chromosome, complete genomearginine/ornithine antiporter8e-68258
NC_017289:834781:8367598367598382191461Chlamydophila psittaci 01DC11 chromosome, complete genomearginine/ornithine antiporter8e-68258
NC_017291:829577:8339408339408354001461Chlamydophila psittaci C19/98 chromosome, complete genomeamino acid permease8e-68258
NC_017292:834749:8367278367278381871461Chlamydophila psittaci 02DC15 chromosome, complete genomearginine/ornithine antiporter8e-68258
NC_011663:1500772:1509093150909315104931401Shewanella baltica OS223 chromosome, complete genomeamino acid permease-associated protein2e-65249
NC_012590:1004816:1004816100481610063031488Corynebacterium aurimucosum ATCC 700975, complete genomeL-lysine transport protein1e-60234
NC_017387:1110412:1112344111234411136781335Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomearginine/ornithine antiporter5e-58225
NC_012814:1465738:1479781147978114813161536Bifidobacterium animalis subsp. lactis Bl-04, complete genomeputative arginine/ornithine antiporter2e-56220
NC_012815:1465670:1479713147971314812481536Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeputative arginine/ornithine antiporter2e-56220
NC_004431:4270305:4284198428419842856971500Escherichia coli CFT073, complete genomePutative amino acid antiporter3e-51203
NC_008563:4739333:4762066476206647635651500Escherichia coli APEC O1, complete genomeputative amino acid antiporter3e-51203
NC_004431:4270305:4288246428824642897151470Escherichia coli CFT073, complete genomePutative antiporter4e-50199
NC_008563:4739333:4758048475804847595171470Escherichia coli APEC O1, complete genomeputative antiporter4e-50199
NC_011742:4655373:4672710467271046741791470Escherichia coli S88 chromosome, complete genomemembrane protein4e-50199
NC_016614:1543333:1565362156536215666991338Vibrio sp. EJY3 chromosome 2, complete sequenceamino acid transporter permease5e-21102
NC_003366:64908:7853478534798561323Clostridium perfringens str. 13, complete genomeprobable integral membrane transport protein4e-1479.7
NC_010067:3247169:3268853326885332701901338Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1376.3
NC_008253:334467:3485133485133498231311Escherichia coli 536, complete genomeamino acid permease8e-0962
NC_016614:1543333:1562996156299615643391344Vibrio sp. EJY3 chromosome 2, complete sequenceputrescine transporter9e-0755.5
NC_013508:275081:2913392913392926341296Edwardsiella tarda EIB202, complete genomeputrescine transport protein6e-0652.8