Pre_GI: BLASTP Hits

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Query: NC_011770:3396637:3418624 Pseudomonas aeruginosa LESB58, complete genome

Start: 3418624, End: 3419544, Length: 921

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008463:3168837:319518331951833196103921Pseudomonas aeruginosa UCBPP-PA14, complete genomePutative dehydrogenase4e-142504
NC_008699:590000:604897604897605787891Nocardioides sp. JS614, complete genome6-phosphogluconate dehydrogenase, NAD-binding2e-1996.7
NC_007509:309348:323198323198324103906Burkholderia sp. 383 chromosome 3, complete sequencebeta-hydroxyacid dehydrogenase3e-1582.8
NC_015690:2674187:268260226826022683480879Paenibacillus mucilaginosus KNP414 chromosome, complete genome3-hydroxyisobutyrate dehydrogenase2e-1480.5
NC_016935:3229500:323310332331033233981879Paenibacillus mucilaginosus 3016 chromosome, complete genome3-hydroxyisobutyrate dehydrogenase3e-1479.3
NC_016779:1688946:169637116963711697321951Bacillus cereus F837/76 chromosome, complete genome3-hydroxyisobutyrate dehydrogenase5e-1375.5
NC_018681:5378197:538427253842725385141870Nocardia brasiliensis ATCC 700358 chromosome, complete genome6-phosphogluconate dehydrogenase1e-1170.5
NC_013947:4602959:462105046210504621949900Stackebrandtia nassauensis DSM 44728 chromosome, complete genome6-phosphogluconate dehydrogenase NAD-binding protein2e-1169.7
NC_012491:4231469:425031942503194251218900Brevibacillus brevis NBRC 100599, complete genomehypothetical protein7e-1168.2
NC_015690:3941113:396927339692733970232960Paenibacillus mucilaginosus KNP414 chromosome, complete genomebeta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase2e-1066.6
NC_015690:1109335:114923011492301150093864Paenibacillus mucilaginosus KNP414 chromosome, complete genome6-phosphogluconate dehydrogenase NAD-binding protein2e-1066.6
NC_012522:2931910:293695329369532937828876Rhodococcus opacus B4, complete genomeputative oxidoreductase2e-1067
NC_016935:1636278:171653217165321717464933Paenibacillus mucilaginosus 3016 chromosome, complete genome6-phosphogluconate dehydrogenase3e-1066.2
NC_014815:3005970:301860030186003019484885Micromonospora sp. L5 chromosome, complete genome6-phosphogluconate dehydrogenase nad-binding protein4e-1065.5
NC_019673:1584739:158473915847391585596858Saccharothrix espanaensis DSM 44229 complete genomeDehydrogenase4e-1065.5
NC_007509:309348:318534318534319397864Burkholderia sp. 383 chromosome 3, complete sequencebeta-hydroxyacid dehydrogenase1e-0963.9
NC_013947:4602959:462196446219644622845882Stackebrandtia nassauensis DSM 44728 chromosome, complete genome6-phosphogluconate dehydrogenase NAD-binding protein1e-0964.3
NC_014166:2498500:251823125182312519085855Arcobacter nitrofigilis DSM 7299 chromosome, complete genome2-hydroxy-3-oxopropionate reductase4e-0962.4
NC_012522:3224526:323408132340813234959879Rhodococcus opacus B4, complete genomeputative oxidoreductase8e-0961.2
NC_014931:2336465:235180123518012352655855Variovorax paradoxus EPS chromosome, complete genome6-phosphogluconate dehydrogenase NAD-binding protein1e-0861.2
NC_012522:3224526:325683932568393257732894Rhodococcus opacus B4, complete genomehypothetical protein4e-0652.4