Pre_GI: BLASTP Hits

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Query: NC_011770:3396637:3396637 Pseudomonas aeruginosa LESB58, complete genome

Start: 3396637, End: 3397836, Length: 1200

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016768:2764000:2770546277054627718441299Mycobacterium tuberculosis KZN 4207 chromosome, complete genometranscriptional activator6e-69261
NC_009565:1629780:1642932164293216442301299Mycobacterium tuberculosis F11, complete genomehypothetical transcriptional activator protein6e-69261
NC_002945:1621765:1635127163512716363921266Mycobacterium bovis AF2122/97, complete genometranscriptional activator protein6e-69261
NC_015848:1647523:1662481166248116637461266Mycobacterium canettii CIPT 140010059, complete genomeputative transcriptional activator protein2e-68259
NC_014414:167803:1678031678031690141212Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein2e-59230
NC_008268:3233961:3255809325580932570531245Rhodococcus sp. RHA1, complete genomehypothetical protein4e-25115
NC_013159:2832552:2835826283582628371511326Saccharomonospora viridis DSM 43017, complete genomeregulator of polyketide synthase expression2e-23110
NC_013929:1611940:1632189163218916334301242Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1791.3
NC_018681:7624000:7640808764080876418781071Nocardia brasiliensis ATCC 700358 chromosome, complete genomeFis family transcriptional regulator6e-1789
NC_009338:4913510:4919772491977249210641293Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein6e-0962.4
NC_020210:2133996:2200219220021922018351617Geobacillus sp. GHH01, complete genomepurine catabolism regulatory protein6e-0755.5
NC_008578:1827605:1834844183484418366491806Acidothermus cellulolyticus 11B, complete genomepurine catabolism PurC domain protein2e-0654.3