Pre_GI: BLASTP Hits

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Query: NC_011770:3049830:3076372 Pseudomonas aeruginosa LESB58, complete genome

Start: 3076372, End: 3077304, Length: 933

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008463:2848568:2874987287498728760031017Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein0634
NC_008463:1756434:176250817625081763482975Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein6e-87320
NC_011770:1811874:1815627181562718170841458Pseudomonas aeruginosa LESB58, complete genomehypothetical protein5e-83307
NC_002516:2750128:275691827569182757898981Pseudomonas aeruginosa PAO1, complete genomehypothetical protein4e-82304
NC_008463:2848568:287326528732652874218954Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein8e-82303
NC_011770:3049830:307465030746503075549900Pseudomonas aeruginosa LESB58, complete genomehypothetical protein3e-81301
NC_018080:2732962:274314027431402743649510Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-69262
NC_016830:3697173:3729315372931537307991485Pseudomonas fluorescens F113 chromosome, complete genomeyd repeat-containing protein5e-68258
NC_007005:2686551:2696813269681326983151503Pseudomonas syringae pv. syringae B728a, complete genomeYD repeat6e-58224
NC_007005:2686551:2695281269528126968071527Pseudomonas syringae pv. syringae B728a, complete genomeYD repeat7e-56217
NC_010511:2703684:2714216271421627177493534Methylobacterium sp. 4-46 chromosome, complete genomeYD repeat-containing protein8e-34144
NC_005085:1269787:1303614130361413070123399Chromobacterium violaceum ATCC 12472, complete genomeprobable rhs-related protein1e-28127
NC_003296:1980687:1988766198876619913572592Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE RHS-RELATED TRANSMEMBRANE PROTEIN2e-28126
NC_014366:354000:3613563613563662424887Gamma proteobacterium HdN1, complete genomeRhs family protein3e-28125
NC_003295:2669480:2678417267841726810892673Ralstonia solanacearum GMI1000, complete genomePROBABLE RHS-RELATED PROTEIN2e-27123
NC_014311:978761:1004505100450510071082604Ralstonia solanacearum PSI07 chromosome, complete genomeRHS_repeat4e-27122
NC_014311:263963:2865312865312887052175Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein1e-26120
NC_003296:87313:9248392483949392457Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE RHS-RELATED PROTEIN1e-26120
NC_014972:1621850:1639704163970416464836780Desulfobulbus propionicus DSM 2032 chromosome, complete genomeYD repeat-containing protein2e-26119
NC_014307:939601:9468239468239495102688Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein6e-26118
NC_003296:556836:5746865746865761851500Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE RHS-RELATED PROTEIN6e-26118
NC_003296:556836:5724935724935742561764Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE RHS-RELATED PROTEIN5e-25115
NC_014311:3348102:3352845335284533550282184Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein3e-24112
NC_014307:233045:2518782518782535751698Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein5e-23108
NC_014311:263963:2841772841772863692193Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein9e-22104
NC_014366:2393702:2401915240191524068614947Gamma proteobacterium HdN1, complete genomeprobable Rhs family protein7e-21101
NC_014366:2393702:2409091240909124139204830Gamma proteobacterium HdN1, complete genomehypothetical protein3e-2099.4
NC_015677:1282865:1307871130787113114913621Ramlibacter tataouinensis TTB310 chromosome, complete genomeRhs protein2e-1892.8
NC_007508:3835000:3845309384530938487433435Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeRhs family protein1e-1790.5
NC_003296:556836:5698085698085718532046Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE RHS-RELATED PROTEIN2e-1789.7
NC_020541:1510782:1517677151767715198932217Rhodanobacter sp. 2APBS1, complete genomeRhs family protein9e-1787.8
NC_016010:1822212:1834166183416618380413876Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeRhs family protein1e-1687.4
NC_014307:3240430:3244546324454632471852640Ralstonia solanacearum CFBP2957 chromosome, complete genomerhs-like protein2e-1377
NC_020541:268406:2762482762482803034056Rhodanobacter sp. 2APBS1, complete genomeRHS repeat-associated core domain protein3e-1375.9
NC_013422:991500:1007521100752110119244404Halothiobacillus neapolitanus c2, complete genomeYD repeat protein6e-1375.1
NC_007086:155223:1652631652631695074245Xanthomonas campestris pv. campestris str. 8004, complete genomeRhsD protein8e-1271.2
NC_003902:155627:1656691656691701744506Xanthomonas campestris pv. campestris str. ATCC 33913, completeRhsD protein8e-1271.2
NC_014307:1619000:1629146162914616306751530Ralstonia solanacearum CFBP2957 chromosome, complete genomerhs-like protein (fragment)1e-1170.5
NC_007508:4765751:4771695477169547760084314Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeRhs family protein2e-1169.7
NC_015947:4248536:4261991426199142642492259Burkholderia sp. JV3 chromosome, complete genomeYD repeat-containing protein4e-1168.9
NC_010943:2815865:2826272282627228306514380Stenotrophomonas maltophilia K279a, complete genomeputative Rhs-family transmembrane protein6e-1168.6
NC_003919:3812778:3823370382337038279024533Xanthomonas axonopodis pv. citri str. 306, complete genomeRhsD protein1e-1067.4
NC_010943:4527366:4534194453419445387354542Stenotrophomonas maltophilia K279a, complete genomeputative Rhs-family exported protein2e-1066.6
NC_003919:2956404:2962809296280929675874779Xanthomonas axonopodis pv. citri str. 306, complete genomeRhsD protein3e-1065.9
NC_011071:10842:1735017350205743225Stenotrophomonas maltophilia R551-3, complete genomeYD repeat protein1e-0963.9
NC_010002:4073724:4086686408668640905913906Delftia acidovorans SPH-1, complete genomeYD repeat protein8e-0961.2
NC_014307:1619000:1630533163053316317231191Ralstonia solanacearum CFBP2957 chromosome, complete genomecore protein (fragment)9e-0961.2
NC_003296:556836:5669375669375695822646Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE RHS-RELATED PROTEIN1e-0860.5
NC_016791:3851454:38636243863624387462411001Clostridium sp. BNL1100 chromosome, complete genomeRHS repeat-associated core domain-containing protein4e-0755.5
NC_013216:3061491:3079669307966930834843816Desulfotomaculum acetoxidans DSM 771, complete genomeYD repeat protein1e-0653.9
NC_015947:1142206:1149211114921111537614551Burkholderia sp. JV3 chromosome, complete genomeRHS repeat-associated core domain-containing protein1e-0653.9
NC_007086:3118116:3125910312591031303074398Xanthomonas campestris pv. campestris str. 8004, complete genomeRhsD protein3e-0652.8
NC_003902:1858349:1908315190831519105072193Xanthomonas campestris pv. campestris str. ATCC 33913, completeRhsD protein precursor4e-0652.4
NC_008060:2913671:2913671291367129164752805Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceYD repeat9e-0651.2