Pre_GI: BLASTP Hits

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Query: NC_011770:2690501:2695787 Pseudomonas aeruginosa LESB58, complete genome

Start: 2695787, End: 2696728, Length: 942

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011770:1431740:144026814402681441263996Pseudomonas aeruginosa LESB58, complete genomeDNA methylase N-4/N-68e-174609
NC_017208:1831918:185634018563401857320981Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA methylase N-4/N-61e-70266
NC_009089:1283000:130570513057051306664960Clostridium difficile 630, complete genomemodification DNA methylase3e-65248
NC_009253:897684:919365919365920264900Desulfotomaculum reducens MI-1 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein5e-65248
NC_011979:646518:656035656035656937903Geobacter sp. FRC-32, complete genomeDNA methylase N-4/N-6 domain protein5e-64244
NC_012914:1851102:1877054187705418781301077Paenibacillus sp. JDR-2, complete genomeDNA methylase N-4/N-6 domain protein6e-63241
NC_012471:1197534:1258666125866612597001035Streptococcus equi subsp. equi 4047, complete genomemodification DNA methylase7e-63241
NC_007508:1221500:124360012436001244499900Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeSite-specific DNA-methyltransferase (cytosine-N(4)-specific)5e-62238
NC_010170:1324758:135891913589191359878960Bordetella petrii, complete genomeadenine DNA methyltransferase protein4e-59228
NC_008752:585884:607126607126608097972Acidovorax avenae subsp. citrulli AAC00-1, complete genomeDNA methylase N-4/N-6 domain protein2e-55216
NC_017186:2252438:2263985226398522650221038Amycolatopsis mediterranei S699 chromosome, complete genomeadenine-specific DNA-methyltransferase2e-42173
NC_014318:2252417:2263964226396422650011038Amycolatopsis mediterranei U32 chromosome, complete genomeputative adenine-specific DNA-methyltransferase2e-42173
NC_013131:8480384:8514006851400685150431038Catenulispora acidiphila DSM 44928, complete genomeDNA methylase N-4/N-6 domain protein5e-42171
NC_007434:1712000:1782557178255717836931137Burkholderia pseudomallei 1710b chromosome I, complete sequenceDNA methylase8e-42171
NC_007650:1192310:1209408120940812105441137Burkholderia thailandensis E264 chromosome II, complete sequencegp561e-41170
NC_005085:1:717371738069897Chromobacterium violaceum ATCC 12472, complete genomeprobable DNA methyltransferase4e-41168
NC_017186:7822448:783281978328197833625807Amycolatopsis mediterranei S699 chromosome, complete genomeadenine-specific DNA-methyltransferase2e-38160
NC_014318:7821227:783277378327737833579807Amycolatopsis mediterranei U32 chromosome, complete genomeputative adenine-specific DNA-methyltransferase2e-38160
NC_012490:43000:541995419955074876Rhodococcus erythropolis PR4, complete genomeDNA methyltransferase2e-38159
NC_013441:1487058:1499150149915015001871038Gordonia bronchialis DSM 43247, complete genomeDNA methylase N-4/N-6 domain protein9e-38157
NC_014814:3926676:3931021393102139320791059Mycobacterium sp. Spyr1 chromosome, complete genomeDNA modification methylase2e-37156
NC_020054:4625895:463746246374624638367906Fibrella aestuarina BUZ 2 drat genomeputative adenine-specific DNA-methyltransferase2e-33142
NC_013947:6585847:6613656661365666146571002Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein5e-32138
NC_013235:5127148:5158882515888251599401059Nakamurella multipartita DSM 44233, complete genomeDNA methylase N-4/N-6 domain protein2e-31136
NC_011769:247202:2560562560562572551200Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeDNA methylase N-4/N-6 domain protein3e-24112
NC_007973:2888824:2903604290360429047701167Ralstonia metallidurans CH34 chromosome 1, complete sequenceDNA methylase N-4/N-63e-2099.4
NC_014246:1457992:1469749146974914709661218Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative site-specific DNA-methyltransferase1e-1790.5
NC_016111:4115097:4131951413195141330931143Streptomyces cattleya NRRL 8057, complete genomeDNA methylase N-4/N-63e-1582.8
NC_011831:2728932:2738415273841527394851071Chloroflexus aggregans DSM 9485, complete genomeDNA methylase N-4/N-6 domain protein2e-1480.5
NC_015850:1242010:124806012480601248764705Acidithiobacillus caldus SM-1 chromosome, complete genomecellulase3e-1479.3
NC_014837:3633378:3649961364996136511361176Pantoea sp. At-9b chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-1377.4
NC_012721:2021885:2032511203251120336531143Burkholderia glumae BGR1 chromosome 2, complete genomeDNA methyltransferase2e-1377
NC_012778:1819559:183252918325291833332804Eubacterium eligens ATCC 27750, complete genomesite-specific DNA-methyltransferase (adenine-specific)5e-1272
NC_018607:2747462:276222627622262763002777Brachyspira pilosicoli B2904 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-1169.7
NC_014150:2201251:223851922385192239298780Brachyspira murdochii DSM 12563 chromosome, complete genomeDNA methylase N-4/N-6 domain protein2e-1169.7
NC_014330:1324500:133930513393051340087783Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-1169.7
NC_018604:2871328:288627128862712887047777Brachyspira pilosicoli WesB complete genomeDNA methylase N-4/N-6 domain-containing protein3e-1169.7
NC_009255:1250939:130151013015101302361852Burkholderia vietnamiensis G4 chromosome 2, complete sequenceDNA methylase N-4/N-6 domain-containing protein4e-1168.9
NC_017188:1172181:126806612680661268905840Bacillus amyloliquefaciens TA208 chromosome, complete genomeModification methylase BamHII3e-0963.2
NC_017191:1173989:126964312696431270482840Bacillus amyloliquefaciens XH7 chromosome, complete genomemodification methylase BamHII3e-0963.2
NC_020126:7255111:727680772768077277688882Myxococcus stipitatus DSM 14675, complete genomeadenine-specific DNA methyltransferase4e-0962.4
NC_014410:800500:8086658086658099631299Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,DNA methylase N-4/N-6 domain protein7e-0961.6
NC_015520:2974048:2991504299150429928021299Mahella australiensis 50-1 BON chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein7e-0961.6
NC_016627:4323370:4354066435406643553641299Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA modification methylase8e-0961.6
NC_018870:2316499:2355642235564223569401299Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA methylase1e-0861.2
NC_009012:1934107:1965665196566519669631299Clostridium thermocellum ATCC 27405, complete genomeDNA methylase N-4/N-69e-0961.2
NC_014731:296000:1789178935431755Halogeometricum borinquense DSM 11551 plasmid pHBOR02, completeDNA modification methylase1e-0860.8
NC_009615:3904962:393457839345783935525948Parabacteroides distasonis ATCC 8503 chromosome, complete genomeDNA-methyltransferase2e-0860.1
NC_015593:1587684:1590233159023315915491317Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeDNA methylase N-4/N-6 domain-containing protein4e-0859.3
NC_011831:2728932:274050127405012741490990Chloroflexus aggregans DSM 9485, complete genomeDNA methylase N-4/N-6 domain protein4e-0859.3
NC_015573:813000:8142908142908156331344Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein4e-0858.9
NC_016025:596670:6064136064136074531041Candidatus Chloracidobacterium thermophilum B chromosome chromosomeDNA modification methylase8e-0858.2
NC_008687:965152:972636972636973571936Paracoccus denitrificans PD1222 chromosome 2, complete sequenceDNA methylase N-4/N-6 domain protein8e-0858.2
NC_015711:4319648:433960343396034340313711Myxococcus fulvus HW-1 chromosome, complete genomeputative DNA methyltransferase1e-0757.4
NC_014314:69872:792407924080220981Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeDNA methylase N-4/N-6 domain-containing protein2e-0757
NC_009012:1934107:1964406196440619656591254Clostridium thermocellum ATCC 27405, complete genomeParB-like nuclease2e-0756.6
NC_014217:4550544:4555744455574445571861443Starkeya novella DSM 506 chromosome, complete genomeDNA methylase N-4/N-6 domain protein2e-0756.6
NC_015589:366296:372588372588373487900Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-0756.6
NC_018870:2316499:2354383235438323556361254Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA methylase2e-0756.6
NC_015422:2078618:2108728210872821099901263Alicycliphilus denitrificans K601 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-0756.2
NC_016111:2892391:289888828988882899634747Streptomyces cattleya NRRL 8057, complete genomeDNA methylase3e-0756.2
NC_010831:40000:4454244542458671326Chlorobium phaeobacteroides BS1, complete genomeDNA methylase N-4/N-6 domain protein3e-0755.8
NC_009659:3103601:3103601310360131048361236Janthinobacterium sp. Marseille chromosome, complete genomeDNA modification methylase4e-0755.8
NC_011831:4043802:4052982405298240540251044Chloroflexus aggregans DSM 9485, complete genomeDNA methylase N-4/N-6 domain protein5e-0755.5
NC_017190:2130651:216542221654222166258837Bacillus amyloliquefaciens LL3 chromosome, complete genomeDNA modification methylase6e-0755.1
NC_010084:2484000:2488925248892524901901266Burkholderia multivorans ATCC 17616 chromosome 1, completeDNA methylase N-4/N-6 domain-containing protein8e-0754.7
NC_010804:996837:1034583103458310358481266Burkholderia multivorans ATCC 17616 chromosome 1, completeputative DNA methylase8e-0754.7
NC_013722:2848366:2849628284962828509261299Xanthomonas albilineans, complete genomeputative adn methyltransferase protein1e-0654.3
NC_009621:389181:3934683934683955912124Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequenceadenine-specific DNA-methyltransferase1e-0654.3
NC_004369:1552847:1558925155892515600371113Corynebacterium efficiens YS-314, complete genomehypothetical protein1e-0653.9
NC_015562:1816000:183292918329291833705777Methanotorris igneus Kol 5 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-0653.5
NC_011958:976500:1005431100543110068071377Rhodobacter sphaeroides KD131 chromosome 2, complete genomeDNA modification methylase2e-0653.1
NC_002978:234082:2486082486082498371230Wolbachia endosymbiont of Drosophila melanogaster, complete genomeprophage LambdaW1, DNA methylase2e-0653.1
NC_015422:2078618:2107316210731621087311416Alicycliphilus denitrificans K601 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein4e-0652.4
NC_011365:1103927:110848411084841109161678Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein4e-0652.4
NC_009659:3103601:3102180310218031036041425Janthinobacterium sp. Marseille chromosome, complete genomephage related DNA methyltransferase5e-0652.4
NC_008212:1295061:1300720130072013022701551Haloquadratum walsbyi DSM 16790, complete genomesite-specific DNA-methyltransferase5e-0652
NC_015067:1183824:1194549119454911957751227Bifidobacterium longum subsp. longum JCM 1217, complete genomephage protein6e-0652
NC_016025:65923:724357243573424990Candidatus Chloracidobacterium thermophilum B chromosome chromosomeDNA modification methylase6e-0651.6