Pre_GI: BLASTP Hits

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Query: NC_011770:2690501:2690501 Pseudomonas aeruginosa LESB58, complete genome

Start: 2690501, End: 2691526, Length: 1026

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:4484824:449569044956904496649960Pseudomonas putida KT2440, complete genomesite-specific recombinase, phage integrase family3e-118425
NC_017986:4885979:4888798488879848898621065Pseudomonas putida ND6 chromosome, complete genomeintegrase4e-103374
NC_012660:3689223:370301937030193703990972Pseudomonas fluorescens SBW25 chromosome, complete genomeintegrase (pseudogene)1e-99363
NC_008027:2331617:2337757233775723388061050Pseudomonas entomophila L48, complete genomesite-specific recombinase, integrase family5e-98357
NC_017986:4931104:4946514494651449475211008Pseudomonas putida ND6 chromosome, complete genomephage integrase5e-96351
NC_011770:860944:8639658639658650141050Pseudomonas aeruginosa LESB58, complete genomeIntegrase1e-93343
NC_017033:1052000:1053148105314810541671020Frateuria aurantia DSM 6220 chromosome, complete genomesite-specific recombinase XerC4e-53208
NC_007005:3414579:3419554341955434205881035Pseudomonas syringae pv. syringae B728a, complete genomePhage integrase:Phage integrase, N-terminal SAM-like3e-49195
NC_012724:359444:3687393687393697581020Burkholderia glumae BGR1 chromosome 1, complete genomePhage-related integrase2e-43176
NC_015942:403296:4159944159944170011008Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein1e-31137
NC_010645:369408:4026334026334036671035Bordetella avium 197N, complete genomeintegrase8e-31134
NC_013446:4045000:4052312405231240533461035Comamonas testosteroni CNB-2, complete genomehypothetical protein9e-30131
NC_012724:359444:3783543783543793821029Burkholderia glumae BGR1 chromosome 1, complete genomePhage integrase:Phage integrase, N-terminal SAM-like protein3e-29129
NC_009053:553298:5572235572235582631041Actinobacillus pleuropneumoniae L20, complete genomepredicted phage integrase family protein4e-28125
NC_009656:2663387:266807926680792668627549Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family protein4e-22105
NC_013446:2761000:277649127764912777219729Comamonas testosteroni CNB-2, complete genomehypothetical protein7e-21101
NC_016816:2953530:2977372297737229783941023Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family6e-2098.6
NC_010508:451184:461527461527462063537Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence1e-1997.8
NC_007712:1954808:1974024197402419750401017Sodalis glossinidius str. 'morsitans', complete genomephage integrase7e-1995.1
NC_011205:2180598:218594621859462186935990Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853integrase protein3e-1686.3
NC_011294:2053991:205795920579592058948990Salmonella enterica subsp. enterica serovar Enteritidis strphage integrase3e-1686.3
NC_009656:2663387:266862426686242669106483Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family protein4e-1685.9
NC_007712:2028500:2057823205782320588451023Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase7e-1685.1
NC_009708:2537557:2555953255595325569691017Yersinia pseudotuberculosis IP 31758 chromosome, complete genomephage integrase family site specific recombinase2e-1583.6
NC_006155:2116834:2128303212830321293251023Yersinia pseudotuberculosis IP 32953, complete genomeputative integrase2e-1583.6
NC_013132:7954000:7968218796821879694891272Chitinophaga pinensis DSM 2588, complete genomeintegrase family protein8e-1581.3
NC_012779:2127542:2148941214894121499511011Edwardsiella ictaluri 93-146, complete genomesite-specific recombinase, phage integrase family4e-1479
NC_007712:1926500:193080019308001931645846Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase5e-1479
NC_020181:2097066:2117522211752221185741053Enterobacter aerogenes EA1509E, complete genomePutative integrase5e-1479
CP002797:4812799:4826760482676048278061047Escherichia coli NA114, complete genomePutative integrase9e-1478.2
NC_007712:1712667:171266717126671713602936Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase3e-1376.3
NC_005810:1663672:167309716730971673675579Yersinia pestis biovar Microtus str. 91001, complete genomeintegrase3e-1376.3
NC_012721:1052883:105740610574061057858453Burkholderia glumae BGR1 chromosome 2, complete genomePhage integrase family protein5e-1375.5
NC_007005:1738500:174509817450981745496399Pseudomonas syringae pv. syringae B728a, complete genome2e-1273.9
NC_015388:1020747:102930310293031030148846Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeintegrase family protein2e-1273.6
NC_009381:1414985:142000214200021420559558Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-1273.6
NC_008150:1384102:139870513987051399262558Yersinia pestis Antiqua, complete genomehypothetical protein2e-1273.2
NC_008149:2517538:253577225357722536329558Yersinia pestis Nepal516, complete genomehypothetical protein2e-1273.2
NC_003143:2101902:211562621156262116141516Yersinia pestis CO92, complete genomehypothetical protein1e-1171.2
NC_017168:3535786:354487235448723545387516Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-1171.2
NC_017265:2306500:232086923208692321384516Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Integrase1e-1171.2
NC_011770:2499432:2540392254039225415041113Pseudomonas aeruginosa LESB58, complete genomephage integrase, putative2e-1170.1
NC_016609:4233701:4271948427194842730391092Niastella koreensis GR20-10 chromosome, complete genomeintegrase family protein4e-1169.3
NC_013364:2898964:2916736291673629178061071Escherichia coli O111:H- str. 11128, complete genomeputative integrase4e-1169.3
NC_011601:1039500:1043517104351710445901074Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase7e-1065.1
NC_007759:2179000:2183062218306221841561095Syntrophus aciditrophicus SB, complete genomephage integrase family protein1e-0964.3
NC_011601:717072:7208917208917219611071Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase1e-0964.3
NC_014355:288000:2962442962442972841041Candidatus Nitrospira defluvii, complete genomeputative phage integrase1e-0964.3
NC_012967:786534:7879527879527890221071Escherichia coli B str. REL606 chromosome, complete genomeintegrase3e-0963.2
NC_013941:975353:9807899807899818591071Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage integrase family3e-0963.2
NC_010682:3313944:3349996334999633510511056Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein5e-0962
NC_008313:2685531:2688767268876726898131047Ralstonia eutropha H16 chromosome 1, complete sequencephage integrase family protein9e-0961.2
NC_015381:429940:4389684389684400111044Burkholderia gladioli BSR3 chromosome 1, complete sequencephage integrase1e-0861.2
NC_012856:3000839:3011439301143930124941056Ralstonia pickettii 12D chromosome 1, complete genomeintegrase family protein1e-0860.8
NC_008542:483761:4912204912204922631044Burkholderia cenocepacia HI2424 chromosome 1, complete sequencephage integrase family protein2e-0860.5
NC_008060:2913671:2934382293438229354251044Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephage integrase2e-0860.5
NC_011770:1431740:1433854143385414349571104Pseudomonas aeruginosa LESB58, complete genomephage integrase, putative2e-0860.1
NC_012947:3015985:302838230283823029305924Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelambda integrase3e-0859.7
NC_014355:1223243:1233478123347812345481071Candidatus Nitrospira defluvii, complete genomeputative integrase5e-0858.9
NC_008781:4178115:418438241843824185365984Polaromonas naphthalenivorans CJ2, complete genomephage integrase family protein1e-0757.4
NC_013364:1997891:201108120110812011473393Escherichia coli O111:H- str. 11128, complete genome2e-0757
NC_015379:6226661:6232535623253562336681134Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative phage integrase2e-0757
NC_013361:1754346:176509417650941765786693Escherichia coli O26:H11 str. 11368 chromosome, complete genome2e-0757
NC_013008:1715831:172409317240931724785693Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeintegrase2e-0757
NC_002695:1794635:180352718035271804219693Escherichia coli O157:H7 str. Sakai, complete genomeintegrase2e-0757
NC_011353:1716037:172511817251181725858741Escherichia coli O157:H7 str. EC4115 chromosome, complete genome3e-0756.6
NC_013941:1613595:162264716226471623387741Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeintegrase3e-0756.6
NC_007712:2897000:2906392290639229075161125Sodalis glossinidius str. 'morsitans', complete genomephage integrase2e-0756.6
NC_002655:2264773:228294922829492283650702Escherichia coli O157:H7 EDL933, complete genomeputative integrase fragment2e-0756.6
NC_011601:1466496:147555814755581476250693Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome2e-0756.6
NC_015684:362236:3848903848903859091020Oligotropha carboxidovorans OM5 chromosome, complete genomeshufflon-specific DNA recombinase3e-0756.2
NC_007508:1446526:1462729146272914638351107Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeshufflon-specific recombinase6e-0755.5
NC_007434:1809946:1853156185315618541751020Burkholderia pseudomallei 1710b chromosome I, complete sequenceprobable site-specific8e-0755.1
NC_015422:910292:9166939166939177841092Alicycliphilus denitrificans K601 chromosome, complete genomeintegrase family protein2e-0653.9
NC_008260:2340824:2352446235244623535491104Alcanivorax borkumensis SK2, complete genomeshufflon-specific DNA recombinase3e-0653.1
NC_014722:771483:788089788089788976888Burkholderia rhizoxinica HKI 454, complete genomeDNA integration/recombination/inversion protein3e-0652.8
NC_008380:4968492:497566649756664976619954Rhizobium leguminosarum bv. viciae 3841, complete genomeputative shufflon-specific DNA recombinase4e-0652.4
NC_020063:3690308:3710476371047637115491074Enterobacteriaceae bacterium strain FGI 57, complete genomeIntegrase4e-0652.4
NC_004578:568236:5847805847805860211242Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family5e-0652.4