Pre_GI: BLASTP Hits

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Query: NC_011770:2046490:2055868 Pseudomonas aeruginosa LESB58, complete genome

Start: 2055868, End: 2056869, Length: 1002

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:1834754:1844025184402518450531029Pseudomonas aeruginosa DK2 chromosome, complete genomeO-antigen chain length regulator4e-103374
NC_008463:2017607:2026846202684620279281083Pseudomonas aeruginosa UCBPP-PA14, complete genomeO-antigen chain length regulator1e-96353
NC_009656:1994392:2003647200364720046961050Pseudomonas aeruginosa PA7 chromosome, complete genomeO-antigen chain length regulator6e-82304
NC_020829:5174354:520016652001665201053888Pseudomonas denitrificans ATCC 13867, complete genomeO-antigen chain length regulator2e-57223
NC_016830:1901488:1909883190988319109291047Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein3e-55215
NC_015379:1887275:1895604189560418966531050Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative chain length determinant protein4e-53208
NC_008027:1559083:1570238157023815712781041Pseudomonas entomophila L48, complete genomeO-antigen chain length regulator protein (Wzz)2e-48192
NC_010322:1520973:1529343152934315303861044Pseudomonas putida GB-1 chromosome, complete genomelipopolysaccharide biosynthesis protein2e-45182
NC_007963:1908964:1908964190896419100611098Chromohalobacter salexigens DSM 3043, complete genomelipopolysaccharide biosynthesis1e-0860.8