Pre_GI: BLASTP Hits

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Query: NC_011770:1811874:1832376 Pseudomonas aeruginosa LESB58, complete genome

Start: 1832376, End: 1833254, Length: 879

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008463:1756434:177677017767701777648879Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein4e-91334
NC_007298:2947200:296671929667192967588870Dechloromonas aromatica RCB, complete genomeProtein of unknown function DUF6, transmembrane5e-45181
NC_017075:4259460:426349742634974264402906Rubrivivax gelatinosus IL144, complete genomeputative transmembrane protein6e-32137
NC_013440:4235489:424207742420774243018942Haliangium ochraceum DSM 14365, complete genomeprotein of unknown function DUF6 transmembrane9e-1994.4
NC_010552:2331486:235311423531142353983870Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceprotein of unknown function DUF6 transmembrane1e-1480.9