Pre_GI: BLASTP Hits

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Query: NC_011770:1226923:1244494 Pseudomonas aeruginosa LESB58, complete genome

Start: 1244494, End: 1245561, Length: 1068

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:1100047:1119067111906711201341068Pseudomonas aeruginosa DK2 chromosome, complete genomepermease0670
NC_002516:4285477:4284417428441742854841068Pseudomonas aeruginosa PAO1, complete genomehypothetical protein0670
NC_008463:1223012:1240306124030612413731068Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative permease0670
NC_020829:4246847:4260980426098042620471068Pseudomonas denitrificans ATCC 13867, complete genomepermease3e-149528
NC_007963:3225306:3248193324819332492571065Chromohalobacter salexigens DSM 3043, complete genomepermease YjgP/YjgQ2e-65249
NC_017270:2500815:2514774251477425158441071Vibrio cholerae LMA3984-4 chromosome chromosome I, completePermease3e-62239
NC_008309:555680:5607555607555618251071Haemophilus somnus 129PT, complete genomeconserved permease3e-59229
NC_009832:622969:6258556258556269251071Serratia proteamaculans 568, complete genomepermease YjgP/YjgQ family protein1e-57224
NC_015567:547500:5504605504605515301071Serratia sp. AS9 chromosome, complete genomepermease YjgP/YjgQ family protein2e-57223
NC_015566:547387:5502745502745513441071Serratia sp. AS12 chromosome, complete genomepermease YjgP/YjgQ family protein2e-57223
NC_020211:554736:5611945611945622641071Serratia marcescens WW4, complete genomelipopolysaccharide export ABC permease of the LptBFGC export complex4e-57222
NC_008258:4345400:4367779436777943688611083Shigella flexneri 5 str. 8401, complete genomehypothetical protein6e-57221
NC_010473:4564590:4587149458714945882311083Escherichia coli str. K-12 substr. DH10B, complete genomeconserved inner membrane protein3e-56219
CU928160:4570498:4571598457159845726801083Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative inner membrane protein3e-56219
NC_000913:4462782:4485341448534144864231083Escherichia coli K12, complete genomeconserved inner membrane protein3e-56219
NC_010498:4821519:4842267484226748433491083Escherichia coli SMS-3-5, complete genomeputative permease3e-56219
AC_000091:4472000:4491998449199844930801083Escherichia coli W3110 DNA, complete genomeconserved inner membrane protein3e-56219
NC_011741:4570498:4571598457159845726801083Escherichia coli IAI1 chromosome, complete genomehypothetical protein3e-56219
NC_011742:4795733:4816731481673148178131083Escherichia coli S88 chromosome, complete genomehypothetical protein3e-56219
NC_012967:4449576:4470545447054544716271083Escherichia coli B str. REL606 chromosome, complete genomeinner membrane protein3e-56219
NC_020418:116500:1551581551581562401083Morganella morganii subsp. morganii KT, complete genomePutative Permease3e-56219
NC_007613:4217557:4231919423191942330041086Shigella boydii Sb227, complete genomehypothetical protein2e-56219
CP002797:4603787:4603787460378746048691083Escherichia coli NA114, complete genomeHypothetical protein5e-56218
NC_003198:4676536:4679542467954246806241083Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative inner membrane protein2e-55216
NC_004631:4661000:4662431466243146635131083Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative inner membrane protein2e-55216
NC_016832:4649432:4650511465051146515931083Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Lipopolysaccharide export system permease protein lptG2e-55216
NC_013716:3512950:3512950351295035140321083Citrobacter rodentium ICC168, complete genomeputative permease1e-54214
NC_008800:575141:5780265780265790961071Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-54213
NC_013861:469500:4735714735714746411071Legionella longbeachae NSW150, complete genomemembrane protein2e-54213
NC_015061:4203767:4216002421600242170721071Rahnella sp. Y9602 chromosome, complete genomepermease YjgP/YjgQ family protein7e-54211
NC_017047:4298207:4309943430994343110131071Rahnella aquatilis HX2 chromosome, complete genomelipopolysaccharide ABC transporter permease7e-54211
NC_020063:4127161:4146218414621841473001083Enterobacteriaceae bacterium strain FGI 57, complete genomeputative permease5e-54211
NC_013971:3296272:3330072333007233311481077Erwinia amylovora ATCC 49946 chromosome, complete genomepermease1e-53210
NC_004547:442927:4646464646464657221077Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative permease2e-53209
NC_013592:446092:4490034490034500731071Dickeya dadantii Ech586, complete genomepermease YjgP/YjgQ family protein3e-53209
NC_009381:3680638:3702753370275337038291077Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein8e-53207
NC_012880:4117376:4126575412657541276451071Dickeya dadantii Ech703, complete genomepermease YjgP/YjgQ family protein1e-52207
NC_009053:1257302:1276024127602412771061083Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein2e-52206
NC_010278:1235934:1238052123805212391341083Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,permease2e-52206
NC_012913:280506:3036123036123046791068Aggregatibacter aphrophilus NJ8700, complete genomeconserved permease2e-52206
NC_012912:4194821:4205217420521742062871071Dickeya zeae Ech1591, complete genomepermease YjgP/YjgQ family protein4e-52205
NC_007712:3629358:3648123364812336491931071Sodalis glossinidius str. 'morsitans', complete genomeputative transport protein3e-51202
NC_014500:443874:4502204502204512901071Dickeya dadantii 3937 chromosome, complete genomehypothetical protein4e-51202
NC_013421:478586:4814914814914825671077Pectobacterium wasabiae WPP163, complete genomepermease YjgP/YjgQ family protein7e-51201
NC_002977:2254440:2260437226043722615071071Methylococcus capsulatus str. Bath, complete genomehypothetical protein4e-47188
NC_016632:1695500:1706088170608817071611074Serratia symbiotica str. 'Cinara cedri' chromosome, completelipopolysaccharide export system permease protein1e-44180
NC_015136:813701:8252318252318263791149Burkholderia sp. CCGE1001 chromosome 1, complete sequencepermease YjgP/YjgQ family protein3e-33142
NC_006350:1084930:1120759112075911219101152Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative permease protein3e-33142
NC_008825:2063990:2080492208049220816131122Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-29129
NC_020211:3535622:3541131354113135422101080Serratia marcescens WW4, complete genomeYjgP/YjgQ family permease3e-28126
NC_014306:4106569:4122488412248841235731086Erwinia billingiae Eb661, complete genomePredicted permease8e-26118
NC_010581:709626:7317207317207328081089Beijerinckia indica subsp. indica ATCC 9039, complete genomepermease YjgP/YjgQ family protein2e-1480.1
NC_016148:576946:5887455887455898541110Thermovirga lienii DSM 17291 chromosome, complete genomeYjgP/YjgQ family permease5e-1375.5
NC_006677:295253:3149013149013160911191Gluconobacter oxydans 621H, complete genomehypothetical protein6e-0962
NC_010814:2758902:2773946277394627750251080Geobacter lovleyi SZ, complete genomepermease YjgP/YjgQ family protein1e-0861.2
NC_011979:1683964:1683964168396416850371074Geobacter sp. FRC-32, complete genomepermease YjgP/YjgQ family protein3e-0860.1
NC_010125:2998619:3022558302255830236911134Gluconacetobacter diazotrophicus PAl 5, complete genomeputative permease9e-0858.2
NC_008783:507939:5124225124225135131092Bartonella bacilliformis KC583, complete genomeputative permease, YjgP/YjgQ family2e-0757
NC_014654:454633:4887204887204898201101Halanaerobium sp. 'sapolanicus' chromosome, complete genomepermease YjgP/YjgQ family protein5e-0755.8
NC_013209:1721721:1744063174406317451571095Acetobacter pasteurianus IFO 3283-01, complete genometransporter YjgP/YjgQ7e-0755.1
NC_007514:335085:3350853350853361641080Chlorobium chlorochromatii CaD3, complete genomehypothetical protein7e-0652