Pre_GI: BLASTP Hits

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Query: NC_011770:1226923:1226923 Pseudomonas aeruginosa LESB58, complete genome

Start: 1226923, End: 1227933, Length: 1011

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:1100047:1101498110149811025081011Pseudomonas aeruginosa DK2 chromosome, complete genome23S rRNA mA1618 methyltransferase0662
NC_008463:1223012:1223012122301212240221011Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein0662
NC_002516:4285477:4302041430204143030511011Pseudomonas aeruginosa PAO1, complete genomehypothetical protein0662
NC_005773:1333863:1351680135168013527141035Pseudomonas syringae pv. phaseolicola 1448A, complete genomePredicted SAM-dependent methyltransferase5e-114410
NC_016002:1048420:104842010484201049376957Pseudogulbenkiania sp. NH8B, complete genomeputative SAM-dependent methyltransferase1e-96353
NC_009348:1347500:134829613482961349273978Aeromonas salmonicida subsp. salmonicida A449, complete genomeSAM-dependent methyltransferase1e-92339
NC_015730:921735:940036940036940977942Roseobacter litoralis Och 149 chromosome, complete genomeputative methyltransferase4e-90331
NC_010694:2492378:249698424969842497913930Erwinia tasmaniensis, complete genomeConserved hypothetical protein (DUF890)3e-88325