Query: NC_011769:787496 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome
Start: 787496, End: 811831, Length: 24336
Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria
General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_005863:80843 | 80843 | 104198 | 23356 | Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough | 9e-65 | 256 | BLASTN svg | BLASTP svg |
NC_008741:81914 | 81914 | 118818 | 36905 | Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01, | 4e-39 | 170 | BLASTN svg | BLASTP svg |
NC_019673:895418 | 895418 | 916384 | 20967 | Saccharothrix espanaensis DSM 44229 complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_011769:3712497 | 3712497 | 3732328 | 19832 | Desulfovibrio vulgaris str. 'Miyazaki F', complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_014363:1680578 | 1680578 | 1707382 | 26805 | Olsenella uli DSM 7084 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014323:3895376 | 3895376 | 3915228 | 19853 | Herbaspirillum seropedicae SmR1 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013173:2507516 | 2507516 | 2532850 | 25335 | Desulfomicrobium baculatum DSM 4028, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013202:906044* | 906044 | 937620 | 31577 | Halomicrobium mukohataei DSM 12286, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014532:1713987 | 1713987 | 1737736 | 23750 | Halomonas elongata DSM 2581, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_018750:3141196* | 3141196 | 3160473 | 19278 | Streptomyces venezuelae ATCC 10712, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015711:8909256 | 8909256 | 8929673 | 20418 | Myxococcus fulvus HW-1 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_011901:2466360 | 2466360 | 2519155 | 52796 | Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_011894:5787990 | 5787990 | 5833599 | 45610 | Methylobacterium nodulans ORS 2060, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007005:5367454* | 5367454 | 5394263 | 26810 | Pseudomonas syringae pv. syringae B728a, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |