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Query: NC_011769:787496 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 787496, End: 811831, Length: 24336

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_005863:808438084310419823356Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough9e-65256BLASTN svgBLASTP svg
NC_008741:819148191411881836905Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,4e-39170BLASTN svgBLASTP svg
NC_019673:89541889541891638420967Saccharothrix espanaensis DSM 44229 complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011769:37124973712497373232819832Desulfovibrio vulgaris str. 'Miyazaki F', complete genome8e-1073.8BLASTN svgBLASTP svg
NC_014363:16805781680578170738226805Olsenella uli DSM 7084 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014323:38953763895376391522819853Herbaspirillum seropedicae SmR1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013173:25075162507516253285025335Desulfomicrobium baculatum DSM 4028, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013202:906044*90604493762031577Halomicrobium mukohataei DSM 12286, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014532:17139871713987173773623750Halomonas elongata DSM 2581, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_018750:3141196*3141196316047319278Streptomyces venezuelae ATCC 10712, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015711:89092568909256892967320418Myxococcus fulvus HW-1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011901:24663602466360251915552796Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_011894:57879905787990583359945610Methylobacterium nodulans ORS 2060, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007005:5367454*5367454539426326810Pseudomonas syringae pv. syringae B728a, complete genome3e-0661.9BLASTN svgBLASTP svg