Pre_GI: BLASTP Hits

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Query: NC_011769:820521:829719 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 829719, End: 831161, Length: 1443

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009483:2640403:2734589273458927361121524Geobacter uraniireducens Rf4 chromosome, complete genomelipopolysaccharide biosynthesis protein9e-65248
NC_012918:2896671:2896671289667128981701500Geobacter sp. M21 chromosome, complete genomepolysaccharide chain length determinant protein, PEP-CTERM locus subfamily7e-60231
NC_011146:1998981:2040949204094920424481500Geobacter bemidjiensis Bem, complete genomepolysaccharide chain length determinant protein, PEP-CTERM locus subfamily7e-57221
NC_007517:2241104:2270200227020022717561557Geobacter metallireducens GS-15, complete genomeLipopolysaccharide biosynthesis1e-48194
NC_007298:2568851:2585030258503025864721443Dechloromonas aromatica RCB, complete genomeLipopolysaccharide biosynthesis1e-23111
NC_014315:1956695:1964701196470119662961596Nitrosococcus watsoni C-113 chromosome, complete genomepolysaccharide chain length determinant protein1e-22108
NC_014910:755192:7736587736587752201563Alicycliphilus denitrificans BC chromosome, complete genomepolysaccharide chain length determinant protein, pep-cterm locus subfamily2e-22107
NC_015422:704500:7129787129787145401563Alicycliphilus denitrificans K601 chromosome, complete genomepolysaccharide chain length determinant protein3e-22106
NC_015497:3739556:3764224376422437658041581Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomepolysaccharide chain length determinant protein, PEP-CTERM locus subfamily2e-1997.4
NC_008228:1404126:1409986140998614115691584Pseudoalteromonas atlantica T6c, complete genomelipopolysaccharide biosynthesis1e-1791.7
NC_013960:3326955:3337202333720233388061605Nitrosococcus halophilus Nc4 chromosome, complete genomepolysaccharide chain length determinant protein, PEP-CTERM locus subfamily2e-1790.9
NC_018679:3197347:3218447321844732200151569Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completelipopolysaccharide biosynthesis protein2e-1687.8
NC_010524:3914880:3921737392173739232901554Leptothrix cholodnii SP-6, complete genomepolysaccharide chain length determinant protein, PEP-CTERM locus subfamily1e-1378.2
NC_010995:4083960:4102041410204141035581518Cellvibrio japonicus Ueda107, complete genomepolysaccharide chain length determinant protein2e-1377.4
NC_007645:2779381:2786063278606327875801518Hahella chejuensis KCTC 2396, complete genomeuncharacterized protein involved in exopolysaccharide biosynthesis4e-1376.6
NC_015554:817500:8231338231338247011569Alteromonas sp. SN2 chromosome, complete genomelipopolysaccharide biosynthesis6e-1375.9
NC_015572:1421782:1444250144425014457791530Methylomonas methanica MC09 chromosome, complete genomepolysaccharide chain length determinant protein, PEP-CTERM locus subfamily4e-1169.7
NC_008789:1641774:1648674164867416502181545Halorhodospira halophila SL1, complete genomelipopolysaccharide biosynthesis6e-1169.3
NC_009483:1936486:1937601193760119399732373Geobacter uraniireducens Rf4 chromosome, complete genomenon-specific protein-tyrosine kinase1e-1068.2
NC_012108:2194251:2214483221448322161291647Desulfobacterium autotrophicum HRM2, complete genomeGumC13e-1067
NC_014816:2357000:2373157237315723753222166Asticcacaulis excentricus CB 48 chromosome 1, complete sequencecapsular exopolysaccharide family1e-0965.1
NC_018868:1960542:1994252199425219957601509Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomepolysaccharide chain length determinant protein1e-0965.1
NC_014973:2693672:2711375271137527136572283Geobacter sp. M18 chromosome, complete genomecapsular exopolysaccharide family7e-0859.3
NC_014216:2027017:2027017202701720285821566Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomelipopolysaccharide biosynthesis protein2e-0653.9