Pre_GI: BLASTP Hits

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Query: NC_011769:3434744:3446611 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 3446611, End: 3447765, Length: 1155

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015556:2265940:2315748231574823169771230Pseudomonas fulva 12-X chromosome, complete genomeRadical SAM domain protein2e-62239
NC_009615:2503465:2530033253003325311751143Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein1e-60234
NC_015379:89441:1035301035301046931164Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein7e-60231
NC_016616:2997348:3016497301649730176511155Dechlorosoma suillum PS chromosome, complete genomeHis-Xaa-Ser repeat-associated downstream radical SAM protein2e-56219
NC_011565:665515:6876946876946888301137Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,hypothetical protein5e-54212
NC_012917:1840172:1867012186701218681241113Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeRadical SAM domain protein7e-51201
NC_011283:4438500:4466780446678044678921113Klebsiella pneumoniae 342 chromosome, complete genomeradical SAM protein2e-50200
NC_014500:3175283:3195996319599631971081113Dickeya dadantii 3937 chromosome, complete genomeputative molybdenum cofactor synthesis-step 1 protein isoform 22e-50200
NC_009436:3117661:3133141313314131342531113Enterobacter sp. 638, complete genomeradical SAM protein2e-50199
NC_009792:3245368:3272233327223332733451113Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-50199
NC_013941:3300000:331755033175503318521972Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-49196
NC_012214:2805297:2816319281631928174371119Erwinia pyrifoliae Ep1/96, complete genomeRadical SAM domain protein7e-49194
NC_009349:3396:1641216412176171206Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeradical SAM domain-containing protein3e-45182
NC_014387:2297304:2315638231563823167381101Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeradical SAM domain-containing protein2e-40166
NC_009659:1129066:1139949113994911410431095Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein1e-39164
NC_018000:4958637:4966374496637449674621089Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein7e-34145
NC_016948:2129335:213946821394682139791324Mycobacterium intracellulare MOTT-64 chromosome, complete genomeradical SAM domain-containing protein2e-23110
NC_009033:653462:6708496708496723691521Staphylothermus marinus F1, complete genomeRadical SAM domain protein5e-0962.4
NC_008701:37219:4525245252464211170Pyrobaculum islandicum DSM 4184, complete genomeRadical SAM domain protein3e-0859.7
NC_012622:940990:9590429590429601781137Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeradical SAM protein6e-0858.9
NC_012623:1631985:1631985163198516331211137Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeradical SAM protein6e-0858.9
NC_011653:331986:333172333172334122951Thermosipho africanus TCF52B, complete genomeAstB/chuR-related protein9e-0858.2
NC_002754:1661000:1665410166541016665461137Sulfolobus solfataricus P2, complete genomeCoenzyme PQQ synthesis protein E (pqqE-4)1e-0757.8
NC_015500:484984:4982864982864998001515Treponema brennaborense DSM 12168 chromosome, complete genomeRadical SAM domain protein2e-0653.9
NC_015949:1767552:1782891178289117839581068Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeRadical SAM domain-containing protein4e-0652.8
NC_014500:1862000:1896102189610218975291428Dickeya dadantii 3937 chromosome, complete genomeRadical SAM domain heme biosynthesis protein7e-0652