Pre_GI: BLASTP Hits

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Query: NC_011769:247202:269193 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 269193, End: 271886, Length: 2694

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011883:1182000:1198486119848612012542769Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Radical SAM domain protein0971
NC_015388:2499187:2514908251490825174242517Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeProtein of unknown function DUF23442e-169597
NC_009698:3046833:3054951305495130568011851Clostridium botulinum A str. Hall chromosome, complete genomeradical SAM domain-containing protein1e-143511
NC_010516:3234791:3242920324292032447701851Clostridium botulinum B1 str. Okra, complete genomeradical SAM domain protein4e-143509
NC_016584:5388500:5397821539782153996771857Desulfosporosinus orientis DSM 765 chromosome, complete genomeradical SAM family protein2e-142507
NC_009699:3217315:3225444322544432272941851Clostridium botulinum F str. Langeland chromosome, complete genomeradical SAM domain-containing protein8e-142505
NC_018515:4334240:4362407436240743642631857Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeradical SAM family protein5e-141502
NC_013642:545464:5705055705055723041800Thermotoga naphthophila RKU-10, complete genomeRadical SAM domain protein2e-140500
NC_012563:3416509:3421403342140334232531851Clostridium botulinum A2 str. Kyoto, complete genomeradical SAM domain protein6e-140498
NC_009633:2350892:2367780236778023696211842Alkaliphilus metalliredigens QYMF chromosome, complete genomeradical SAM domain-containing protein3e-139496
NC_000853:771746:7968027968027986011800Thermotoga maritima MSB8, complete genomehypothetical protein3e-139496
NC_014328:794000:8117008117008135531854Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative Fe-S oxidoreductase1e-138494
NC_014836:2325559:2326425232642523289412517Desulfurispirillum indicum S5 chromosome, complete genomehypothetical protein1e-137491
NC_021182:2160580:2178683217868321805301848Clostridium pasteurianum BC1, complete genomeradical SAM family uncharacterized protein1e-133478
NC_010475:2537500:2548021254802125506302610Synechococcus sp. PCC 7002, complete genomeFe-S oxidoreductases family 2 protein (adical SAM domain protein)3e-131469
NC_015949:2002752:2015568201556820174091842Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeRadical SAM domain-containing protein8e-131468
NC_014652:666227:6737466737466755871842Caldicellulosiruptor hydrothermalis 108 chromosome, completeradical sam domain protein4e-129462
NC_020291:5752099:5752099575209957539551857Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeradical SAM domain-containing methylthiotransferase2e-127457
NC_016111:1766010:1826272182627218282271956Streptomyces cattleya NRRL 8057, complete genomehypothetical protein4e-122439
NC_014248:685656:7070677070677097632697Nostoc azollae 0708 chromosome, complete genomehypothetical protein2e-121437
NC_003888:2814360:2827396282739628293811986Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-120434
NC_009616:183772:1904731904731922481776Thermosipho melanesiensis BI429 chromosome, complete genomeradical SAM domain-containing protein3e-115417
NC_013410:2519441:2519441251944125220142574Fibrobacter succinogenes subsp. succinogenes S85 chromosome,radical SAM protein1e-111404
NC_014484:1163576:1180122118012211826682547Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein7e-93342
NC_015577:1974821:1988700198870019909882289Treponema azotonutricium ZAS-9 chromosome, complete genomeradical SAM domain-containing protein3e-80300
NC_013520:1638000:1651468165146816531951728Veillonella parvula DSM 2008, complete genomeRadical SAM domain protein9e-70265
NC_007681:600187:6046606046606061831524Methanosphaera stadtmanae DSM 3091, complete genomepredicted Fe-S oxidoreductase9e-51202
NC_014844:3015738:3019417301941730210871671Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRadical SAM domain-containing protein1e-48195
NC_005042:1719055:1729704172970417312571554Prochlorococcus marinus subsp. marinus str. CCMP1375, completeSAM radical enzyme3e-48194
NC_015636:1603664:1619527161952716208341308Methanothermococcus okinawensis IH1 chromosome, complete genomeRadical SAM domain-containing protein3e-46187
NC_008095:1697157:1711943171194317134871545Myxococcus xanthus DK 1622, complete genomeradical SAM domain protein1e-42176
NC_015711:346436:3487123487123502561545Myxococcus fulvus HW-1 chromosome, complete genomeradical SAM domain-containing protein2e-41171
NC_020126:1830147:1842953184295318444971545Myxococcus stipitatus DSM 14675, complete genomeradical SAM domain-containing protein4e-40167
NC_015320:1260344:1276341127634112777891449Archaeoglobus veneficus SNP6 chromosome, complete genomeRadical SAM domain-containing protein6e-39163
NC_013407:1177731:1181454118145411828331380Methanocaldococcus vulcanius M7, complete genomeRadical SAM domain protein6e-38159
NC_009033:1283645:1298584129858413001461563Staphylothermus marinus F1, complete genomeRadical SAM domain protein8e-37156
NC_009376:1291901:1293927129392712953571431Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeradical SAM domain-containing protein3e-33144
NC_016148:1021138:1043770104377010452571488Thermovirga lienii DSM 17291 chromosome, complete genomeradical SAM protein7e-28126
NC_015953:3313000:3315108331510833169131806Streptomyces sp. SirexAA-E chromosome, complete genomeRadical SAM domain-containing protein6e-1893.6
NC_003888:2814360:281865728186572819433777Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-1688.2
NC_016111:1766010:176998917699891770795807Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-1585.5
NC_016584:5388500:539712053971205397824705Desulfosporosinus orientis DSM 765 chromosome, complete genomeradical SAM-linked protein1e-1482.4
NC_018515:4334240:436170643617064362401696Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeradical SAM-linked protein7e-1376.6
NC_009633:2350892:236961823696182370358741Alkaliphilus metalliredigens QYMF chromosome, complete genomehypothetical protein6e-1170.5
NC_009699:3217315:322475332247533225460708Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein1e-1069.7
NC_020291:5752099:575140557514055752115711Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein1e-0863.2
NC_014652:666227:675574675574676209636Caldicellulosiruptor hydrothermalis 108 chromosome, completehypothetical protein1e-0862.4
NC_010516:3234791:324222932422293242942714Clostridium botulinum B1 str. Okra, complete genomehypothetical protein2e-0862
NC_012563:3416509:342071234207123421425714Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein2e-0862
NC_009455:273519:2907222907222922061485Dehalococcoides sp. BAV1 chromosome, complete genomeradical SAM domain-containing protein2e-0862
NC_009698:3046833:305426030542603054973714Clostridium botulinum A str. Hall chromosome, complete genomehypothetical protein2e-0862
NC_009464:2523092:2544684254468425461291446Uncultured methanogenic archaeon RC-I, complete genomepredicted Fe-S cluster-binding oxidoreductase2e-0862
NC_007356:51080:7733677336788201485Dehalococcoides sp. CBDB1, complete genomeradical SAM/B12 binding domain protein4e-0861.2
NC_015949:2002752:201494620149462015581636Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomehypothetical protein6e-0860.5
NC_021182:2160580:218050821805082181227720Clostridium pasteurianum BC1, complete genomeradical SAM-linked protein8e-0860.1
NC_013552:68003:9497094970964541485Dehalococcoides sp. VS, complete genomeradical SAM/B12 binding domain protein2e-0758.5