Pre_GI: BLASTP Hits

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Query: NC_011769:247202:262238 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 262238, End: 262888, Length: 651

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009665:1831674:184720818472081847801594Shewanella baltica OS185 chromosome, complete genomelysine exporter protein LysE/YggA1e-37155
NC_011001:63986:693316933169948618Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative transporter-LysE family4e-37154
NC_010515:1428664:144540714454071446024618Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)6e-37154
NC_007511:3512100:352625035262503526864615Burkholderia sp. 383 chromosome 2, complete sequenceLysine exporter family protein (LYSE/YGGA)2e-36152
NC_008061:2368517:239002123900212390638618Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)9e-36150
NC_008543:2871747:287634728763472876964618Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)9e-36150
NC_010552:58294:636696366964286618Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)1e-35149
NC_007347:3204637:323485932348593235485627Ralstonia eutropha JMP134 chromosome 1, complete sequenceLysine exporter protein (LYSE/YGGA)2e-35148
NC_014540:1835493:185317018531701853796627Burkholderia sp. CCGE1003 chromosome 2, complete sequencelysine exporter protein LysE/YggA5e-32137
NC_007643:4294818:430960843096084310132525Rhodospirillum rubrum ATCC 11170, complete genomehypothetical protein4e-30131
NC_008686:1383891:140035314003531400946594Paracoccus denitrificans PD1222 chromosome 1, complete sequenceLysine exporter protein (LYSE/YGGA)2e-26119
NC_014532:2298628:229862822986282299227600Halomonas elongata DSM 2581, complete genomehypothetical protein1e-25116
NC_009255:2044291:206944520694452070068624Burkholderia vietnamiensis G4 chromosome 2, complete sequencelysine exporter protein LysE/YggA2e-23109
NC_018643:857911:887828887828888418591Alpha proteobacterium HIMB5 chromosome, complete genomeLysE type translocator1e-22106
NC_009348:3819271:384406838440683844664597Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein1e-22106
NC_009348:3819271:384336238433623843952591Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein4e-22104
NC_015424:748785:772587772587773183597Aeromonas veronii B565 chromosome, complete genomehypothetical protein8e-22103
NC_016002:1326500:135045813504581351036579Pseudogulbenkiania sp. NH8B, complete genomelysine exporter protein LysE/YggA2e-1995.5
NC_012917:4328463:433043543304354331037603Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeLysine exporter protein (LYSE/YGGA)4e-1891.3
NC_014364:894373:897103897103897699597Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)2e-1789.4
NC_013850:2846069:285750528575052858092588Klebsiella variicola At-22 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)1e-1686.7
NC_011283:2836000:286756828675682868155588Klebsiella pneumoniae 342 chromosome, complete genometranslocator protein, LysE family2e-1685.9
NC_005773:5310339:532627353262735326893621Pseudomonas syringae pv. phaseolicola 1448A, complete genometransporter, LysE family2e-1685.9
NC_015424:748785:773381773381773899519Aeromonas veronii B565 chromosome, complete genomeLysine exporter protein6e-1580.9
NC_015690:2553837:256160425616042562179576Paenibacillus mucilaginosus KNP414 chromosome, complete genomelysine exporter protein LysE/YggA7e-1373.9
NC_016935:3103430:311113131111313111706576Paenibacillus mucilaginosus 3016 chromosome, complete genomelysine exporter protein LysE/YggA2e-1272.4
NC_010552:1212000:123158812315881232193606Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)4e-1271.6
NC_020064:1409596:141547114154711416103633Serratia marcescens FGI94, complete genomeputative threonine efflux protein9e-1063.5
NC_020126:2216926:222263522226352223243609Myxococcus stipitatus DSM 14675, complete genomelysine Exporter protein LysE/YggA9e-1063.9
NC_014624:1369642:137157213715721372153582Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-0963.5
NC_004547:667988:689713689713690303591Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-0962
NC_014623:7963238:798199979819997982655657Stigmatella aurantiaca DW4/3-1 chromosome, complete genomelysine exporter family protein5e-0961.2
NC_009901:2272206:227694022769402277560621Shewanella pealeana ATCC 700345, complete genomeLysine exporter protein (LYSE/YGGA)7e-0960.8
NC_009142:4046376:404856940485694049207639Saccharopolyspora erythraea NRRL 2338, complete genomelysine exporter protein (LysE/YggA)2e-0859.3
NC_012880:1127997:113352811335281134226699Dickeya dadantii Ech703, complete genomeLysine exporter protein (LYSE/YGGA)2e-0859.3
NC_014800:329861:345707345707346324618Pseudoalteromonas sp. SM9913 chromosome chromosome II, completeputative efflux protein3e-0858.9
NC_014800:329861:334286334286334903618Pseudoalteromonas sp. SM9913 chromosome chromosome II, completeputative efflux protein3e-0858.9
NC_019842:3921424:392142439214243922128705Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein3e-0858.5
NC_013592:3618248:363092036309203631549630Dickeya dadantii Ech586, complete genomeLysine exporter protein (LYSE/YGGA)8e-0857
NC_020541:2850831:285227328522732852869597Rhodanobacter sp. 2APBS1, complete genomeputative threonine efflux protein1e-0757
NC_020410:3868573:387097138709713871549579Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeLysine exporter protein1e-0757
NC_016812:4246542:427364642736464274350705Sinorhizobium fredii HH103, complete genomeHomoserine/homoserine lactone efflux protein2e-0755.8
NC_017078:179848:181927181927182550624Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1,putative lysine exporter protein6e-0754.3
NC_015497:2859724:286329828632982863918621Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)7e-0754.3
NC_006322:567987:584818584818585396579Bacillus licheniformis ATCC 14580, complete genomeLysE1e-0653.1
NC_006270:568171:585028585028585606579Bacillus licheniformis ATCC 14580, complete genomeLysine exporter protein1e-0653.1
NC_015376:1431728:145099114509911451641651Burkholderia gladioli BSR3 chromosome chromosome 2, completelysine exporter protein LysE/YggA2e-0652.4
NC_020244:4020315:402328040232804023831552Bacillus subtilis XF-1, complete genomelysine exporter protein2e-0652.8
NC_015947:223184:231035231035231670636Burkholderia sp. JV3 chromosome, complete genomelysine exporter protein LysE/YggA2e-0652.8
NC_010170:1417615:143407414340741434691618Bordetella petrii, complete genomeputative amino acid efflux transmembrane protein2e-0652.8
NC_008699:56500:796077960780230624Nocardioides sp. JS614, complete genomeLysine exporter protein (LYSE/YGGA)3e-0652
NC_013947:4695000:469699346969934697640648Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)3e-0651.6
NC_013166:1341575:134576013457601346383624Kangiella koreensis DSM 16069, complete genomeLysine exporter protein (LYSE/YGGA)4e-0651.6
NC_003295:856775:858719858719859351633Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSMEMBRANE PROTEIN5e-0651.2
NC_010125:2483122:251558025155802516203624Gluconacetobacter diazotrophicus PAl 5, complete genomeLysine exporter protein7e-0650.8