Pre_GI: BLASTP Hits

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Query: NC_011769:247202:256056 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 256056, End: 257255, Length: 1200

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014246:1457992:1469749146974914709661218Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative site-specific DNA-methyltransferase2e-128459
NC_011770:1431740:144026814402681441263996Pseudomonas aeruginosa LESB58, complete genomeDNA methylase N-4/N-64e-32139
NC_011979:646518:656035656035656937903Geobacter sp. FRC-32, complete genomeDNA methylase N-4/N-6 domain protein1e-31137
NC_009253:897684:919365919365920264900Desulfotomaculum reducens MI-1 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-30134
NC_007508:1221500:124360012436001244499900Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeSite-specific DNA-methyltransferase (cytosine-N(4)-specific)2e-29130
NC_011770:2690501:269578726957872696728942Pseudomonas aeruginosa LESB58, complete genomeDNA methylase N-4/N-66e-29129
NC_012471:1197534:1258666125866612597001035Streptococcus equi subsp. equi 4047, complete genomemodification DNA methylase2e-26120
NC_010170:1324758:135891913589191359878960Bordetella petrii, complete genomeadenine DNA methyltransferase protein1e-26120
NC_009089:1283000:130570513057051306664960Clostridium difficile 630, complete genomemodification DNA methylase1e-25117
NC_008752:585884:607126607126608097972Acidovorax avenae subsp. citrulli AAC00-1, complete genomeDNA methylase N-4/N-6 domain protein5e-24112
NC_017208:1831918:185634018563401857320981Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA methylase N-4/N-61e-23111
NC_017186:7822448:783281978328197833625807Amycolatopsis mediterranei S699 chromosome, complete genomeadenine-specific DNA-methyltransferase3e-21103
NC_014318:7821227:783277378327737833579807Amycolatopsis mediterranei U32 chromosome, complete genomeputative adenine-specific DNA-methyltransferase3e-21103
NC_005085:1:717371738069897Chromobacterium violaceum ATCC 12472, complete genomeprobable DNA methyltransferase3e-2099.8
NC_012490:43000:541995419955074876Rhodococcus erythropolis PR4, complete genomeDNA methyltransferase1e-1894.4
NC_017186:2252438:2263985226398522650221038Amycolatopsis mediterranei S699 chromosome, complete genomeadenine-specific DNA-methyltransferase1e-1790.9
NC_014318:2252417:2263964226396422650011038Amycolatopsis mediterranei U32 chromosome, complete genomeputative adenine-specific DNA-methyltransferase1e-1790.9
NC_014814:3926676:3931021393102139320791059Mycobacterium sp. Spyr1 chromosome, complete genomeDNA modification methylase3e-1790.1
NC_013947:6585847:6613656661365666146571002Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-1789.7
NC_020054:4625895:463746246374624638367906Fibrella aestuarina BUZ 2 drat genomeputative adenine-specific DNA-methyltransferase5e-1685.9
NC_013131:8480384:8514006851400685150431038Catenulispora acidiphila DSM 44928, complete genomeDNA methylase N-4/N-6 domain protein2e-1583.6
NC_014033:1152994:1164840116484011660841245Prevotella ruminicola 23 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase4e-1582.8
NC_002578:877609:889774889774890703930Thermoplasma acidophilum DSM 1728, complete genomehypothetical protein6e-1582
NC_013665:2176502:219282221928222193739918Methanocella paludicola SANAE, complete genomeputative DNA methylase7e-1582
NC_016025:596670:6064136064136074531041Candidatus Chloracidobacterium thermophilum B chromosome chromosomeDNA modification methylase1e-1481.3
NC_010556:2328303:2335257233525723367351479Exiguobacterium sibiricum 255-15, complete genomeDNA methylase N-4/N-6 domain protein1e-1480.9
NC_012914:1851102:1877054187705418781301077Paenibacillus sp. JDR-2, complete genomeDNA methylase N-4/N-6 domain protein2e-1480.5
NC_011831:4043802:4052982405298240540251044Chloroflexus aggregans DSM 9485, complete genomeDNA methylase N-4/N-6 domain protein5e-1479.3
NC_012973:49208:485134851349211699Helicobacter pylori B38 chromosome, complete genometype II adenine methyltransferase7e-1478.6
NC_011831:2728932:274050127405012741490990Chloroflexus aggregans DSM 9485, complete genomeDNA methylase N-4/N-6 domain protein1e-1378.2
NC_015562:1816000:183292918329291833705777Methanotorris igneus Kol 5 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-1377.8
NC_011831:4043802:4055528405552840566371110Chloroflexus aggregans DSM 9485, complete genomeDNA methylase N-4/N-6 domain protein2e-1377
NC_017190:2130651:216542221654222166258837Bacillus amyloliquefaciens LL3 chromosome, complete genomeDNA modification methylase3e-1376.6
NC_009767:2866668:2879315287931528804241110Roseiflexus castenholzii DSM 13941, complete genomeDNA methylase N-4/N-6 domain protein3e-1376.3
NC_007514:1475323:1486323148632314875641242Chlorobium chlorochromatii CaD3, complete genomeDNA modification methylase-like4e-1376.3
NC_007973:2888824:2903604290360429047701167Ralstonia metallidurans CH34 chromosome 1, complete sequenceDNA methylase N-4/N-67e-1375.5
NC_015311:2626850:2653783265378326550721290Prevotella denticola F0289 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase1e-1274.7
NC_015589:366296:372588372588373487900Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-1274.3
NC_008212:1295061:1297541129754113005072967Haloquadratum walsbyi DSM 16790, complete genomesite-specific DNA-methyltransferase3e-1273.6
NC_012526:300126:3174953174953185081014Deinococcus deserti VCD115, complete genomeputative DNA methylase3e-1273.2
NC_015873:1119500:112830311283031129109807Megasphaera elsdenii DSM 20460, complete genomeDNA (Cytosine-5-)-methyltransferase4e-1272.8
NC_010175:398453:4104884104884116901203Chloroflexus aurantiacus J-10-fl, complete genomeDNA methylase N-4/N-6 domain protein8e-1271.6
NC_012032:398419:4104544104544116561203Chloroflexus sp. Y-400-fl, complete genomeDNA methylase N-4/N-6 domain protein8e-1271.6
NC_012778:1819559:183252918325291833332804Eubacterium eligens ATCC 27750, complete genomesite-specific DNA-methyltransferase (adenine-specific)1e-1170.9
NC_020126:7255111:727680772768077277688882Myxococcus stipitatus DSM 14675, complete genomeadenine-specific DNA methyltransferase2e-1170.9
NC_009718:579291:580462580462581316855Fervidobacterium nodosum Rt17-B1, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-1170.1
CP002207:3520874:3530675353067535317571083Bacillus atrophaeus 1942, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-1170.1
NC_014639:3520874:3530675353067535317571083Bacillus atrophaeus 1942 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-1170.1
NC_010831:40000:4454244542458671326Chlorobium phaeobacteroides BS1, complete genomeDNA methylase N-4/N-6 domain protein3e-1170.1
NC_018604:758819:762103762103763008906Brachyspira pilosicoli WesB complete genomeDNA methylase N-4/N-6 domain-containing protein4e-1169.7
NC_012471:781063:795598795598796308711Streptococcus equi subsp. equi 4047, complete genomeDNA methylase5e-1169.3
NC_014330:1324500:133930513393051340087783Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein7e-1168.9
NC_018604:2871328:288627128862712887047777Brachyspira pilosicoli WesB complete genomeDNA methylase N-4/N-6 domain-containing protein8e-1168.6
NC_006582:883922:8929238929238941341212Bacillus clausii KSM-K16, complete genomeadenine-specific DNA methylase1e-1068.2
NC_008687:965152:972636972636973571936Paracoccus denitrificans PD1222 chromosome 2, complete sequenceDNA methylase N-4/N-6 domain protein1e-1068.2
NC_018607:2747462:276222627622262763002777Brachyspira pilosicoli B2904 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-1067.8
NC_014314:69872:792407924080220981Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeDNA methylase N-4/N-6 domain-containing protein2e-1067
NC_014933:2240000:2256052225605222578061755Bacteroides helcogenes P 36-108 chromosome, complete genomeDNA methylase N-4/N-6 domain protein3e-1066.6
NC_008021:1401249:140520014052001406051852Streptococcus pyogenes MGAS9429, complete genomeadenine-specific methyltransferase6e-1065.9
NC_008023:1426687:142909014290901429941852Streptococcus pyogenes MGAS2096, complete genomeAdenine-specific methyltransferase6e-1065.9
NC_007297:1406796:141074714107471411598852Streptococcus pyogenes MGAS5005, complete genomeadenine-specific methyltransferase6e-1065.9
NC_011831:2728932:2738415273841527394851071Chloroflexus aggregans DSM 9485, complete genomeDNA methylase N-4/N-6 domain protein5e-1065.9
NC_016025:65923:724357243573424990Candidatus Chloracidobacterium thermophilum B chromosome chromosomeDNA modification methylase6e-1065.5
NC_017045:1:132401324014139900Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,DNA methylase n-4/n-6 domain protein1e-0965.1
NC_014410:800500:8086658086658099631299Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,DNA methylase N-4/N-6 domain protein2e-0964.3
NC_015520:2974048:2991504299150429928021299Mahella australiensis 50-1 BON chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-0963.9
NC_009012:1934107:1965665196566519669631299Clostridium thermocellum ATCC 27405, complete genomeDNA methylase N-4/N-62e-0963.9
NC_016627:4323370:4354066435406643553641299Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA modification methylase2e-0963.9
NC_010546:4590994:460997546099754610862888Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceputative DNA methylase N-4/N-64e-0963.2
NC_007434:1712000:1782557178255717836931137Burkholderia pseudomallei 1710b chromosome I, complete sequenceDNA methylase3e-0963.2
NC_007650:1192310:1209408120940812105441137Burkholderia thailandensis E264 chromosome II, complete sequencegp565e-0962.4
NC_010162:2469915:2481320248132024831551836Sorangium cellulosum 'So ce 56', complete genomehypothetical protein6e-0962.4
NC_018870:2316499:2355642235564223569401299Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA methylase6e-0962.4
NC_014150:2201251:223851922385192239298780Brachyspira murdochii DSM 12563 chromosome, complete genomeDNA methylase N-4/N-6 domain protein1e-0861.6
NC_007426:1134937:1142848114284811444551608Natronomonas pharaonis DSM 2160, complete genomemodification methylase2e-0860.5
NS_000195:526983:528804528804529706903Candidatus Cloacamonas acidaminovoransputative Site-specific DNA-methyltransferase (cytosine-N(4)-specific)3e-0860.1
NC_013656:1071667:107946810794681080226759Lactococcus lactis subsp. lactis KF147, complete genomephage DNA methylase3e-0860.1
NC_013929:3299736:3347147334714733489251779Streptomyces scabiei 87.22 chromosome, complete genomerestriction-modification system methyltransferase4e-0859.7
NC_007759:2858240:2865046286504628661311086Syntrophus aciditrophicus SB, complete genometype II restriction-modification system methylation subunit4e-0859.7
NC_020134:1328302:1335275133527513363421068Clostridium stercorarium subsp. stercorarium DSM 8532, completemodification methylase MthZI4e-0859.7
NC_013926:1009718:1012026101202610145752550Aciduliprofundum boonei T469 chromosome, complete genomeDNA methylase N-4/N-6 domain protein4e-0859.3
NC_008212:1295061:1300720130072013022701551Haloquadratum walsbyi DSM 16790, complete genomesite-specific DNA-methyltransferase7e-0858.9
NC_003305:922357:9342649342649356671404Agrobacterium tumefaciens str. C58 chromosome linear, completeDNA methyltransferase7e-0858.9
NC_015660:3328595:3355407335540733574041998Geobacillus thermoglucosidasius C56-YS93 chromosome, completeDNA methylase N-4/N-6 domain-containing protein6e-0858.9
NC_003063:1128370:1139089113908911404741386Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein7e-0858.5
NC_017191:1173989:126964312696431270482840Bacillus amyloliquefaciens XH7 chromosome, complete genomemodification methylase BamHII1e-0758.2
NC_017188:1172181:126806612680661268905840Bacillus amyloliquefaciens TA208 chromosome, complete genomeModification methylase BamHII1e-0758.2
NC_016616:2997348:3006565300656530077311167Dechlorosoma suillum PS chromosome, complete genomeadenine specific DNA methylase Mod1e-0758.2
NC_011992:3375929:3404510340451034056941185Acidovorax ebreus TPSY, complete genomeDNA methylase N-4/N-6 domain protein1e-0758.2
NC_016906:3006748:3013820301382030152681449Gordonia polyisoprenivorans VH2 chromosome, complete genomemethylase HpaI2e-0757.4
NC_016812:152831:1621551621551638941740Sinorhizobium fredii HH103, complete genomemodification methylase EcaI2e-0757
NC_011831:2728932:273633327363332737247915Chloroflexus aggregans DSM 9485, complete genomeDNA methylase N-4/N-6 domain protein3e-0756.6
NC_015164:493159:523368523368524156789Bacteroides salanitronis DSM 18170 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-0756.6
NC_012590:2117027:214046021404602141245786Corynebacterium aurimucosum ATCC 700975, complete genomehypothetical protein3e-0756.6
NC_011420:36272:4740747407487921386Rhodospirillum centenum SW, complete genomeDNA methylase, putative3e-0756.6
NC_010067:4149298:416498041649804165864885Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-0756.2
NC_014837:3633378:3649961364996136511361176Pantoea sp. At-9b chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein6e-0755.8
NC_015977:2807782:2829379282937928310581680Roseburia hominis A2-183 chromosome, complete genomeadenine specific DNA methylase Mod6e-0755.8
NC_010424:697187:7415747415747432111638Candidatus Desulforudis audaxviator MP104C, complete genomeDNA methylase N-4/N-6 domain protein5e-0755.8
NC_009767:4819000:483030748303074831305999Roseiflexus castenholzii DSM 13941, complete genomeDNA methylase N-4/N-6 domain protein5e-0755.8
NC_015422:2078618:2107316210731621087311416Alicycliphilus denitrificans K601 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein7e-0755.5
NC_014963:3942363:396009839600983960934837Terriglobus saanensis SP1PR4 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein7e-0755.5
NC_016111:2892391:289888828988882899634747Streptomyces cattleya NRRL 8057, complete genomeDNA methylase1e-0654.7
NC_012587:1203103:1213202121320212149081707Rhizobium sp. NGR234, complete genomemodification methylase EcaI2e-0654.3
NC_009659:3103601:3102180310218031036041425Janthinobacterium sp. Marseille chromosome, complete genomephage related DNA methyltransferase2e-0654.3
NC_004369:1552847:1558925155892515600371113Corynebacterium efficiens YS-314, complete genomehypothetical protein2e-0654.3
NC_012721:2021885:2032511203251120336531143Burkholderia glumae BGR1 chromosome 2, complete genomeDNA methyltransferase1e-0654.3
NC_008825:2525380:254891425489142549837924Methylibium petroleiphilum PM1, complete genomeDNA modification methylase-like protein2e-0653.9
NC_020126:4084114:410195241019524102809858Myxococcus stipitatus DSM 14675, complete genomeDNA methylase N-4/N-64e-0653.1