Pre_GI: BLASTP Hits

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Query: NC_011769:247202:249806 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 249806, End: 251251, Length: 1446

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013209:2582878:2619580261958026225402961Acetobacter pasteurianus IFO 3283-01, complete genomeglycine dehydrogenase1e-56221
NC_014374:344500:3545253545253560901566Acidilobus saccharovorans 345-15 chromosome, complete genomeglycine dehydrogenase subunit 22e-93343
NC_018691:318662:3233803233803248521473Alcanivorax dieselolei B5 chromosome, complete genomeputative glycine dehydrogenase [decarboxylating] subunit 22e-115416
NC_007760:1415663:1437863143786314393411479Anaeromyxobacter dehalogenans 2CP-C, complete genomeGlycine dehydrogenase (decarboxylating)5e-119428
NC_014219:2491021:2509062250906225105251464Bacillus selenitireducens MLS10 chromosome, complete genomeGlycine dehydrogenase (decarboxylating)2e-130466
NC_014219:2509062:2509062250906225105251464Bacillus selenitireducens MLS10 chromosome, complete genomeGlycine dehydrogenase (decarboxylating)2e-130466
NC_016776:2516149:2516149251614925189982850Bacteroides fragilis 638R, complete genomeputative glycine dehydrogenase5e-50199
NC_006347:2375480:2375480237548023783292850Bacteroides fragilis YCH46, complete genomeglycine dehydrogenase1e-50201
NC_008783:1101973:1124711112471111275062796Bartonella bacilliformis KC583, complete genomeglycine dehydrogenase1e-55217
NC_015380:859424:8696218696218724852865Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomeglycine dehydrogenase [decarboxylating] (glycine cleavage system P protein)6e-55215
NC_011027:136954:1404241404241419111488Chlorobaculum parvum NCIB 8327, complete genomeGlycine dehydrogenase (decarboxylating)3e-130465
NC_010001:1884500:1891576189157618930361461Clostridium phytofermentans ISDg, complete genomeGlycine dehydrogenase (decarboxylating)2e-113409
NC_011295:929293:9446209446209460621443Coprothermobacter proteolyticus DSM 5265, complete genomeglycine dehydrogenase subunit 25e-114411
NC_008025:1998500:2003596200359620064602865Deinococcus geothermalis DSM 11300, complete genomeglycine dehydrogenase5e-55215
NC_015161:2060369:2072461207246120753042844Deinococcus proteolyticus MRP chromosome, complete genomeGlycine dehydrogenase (decarboxylating)3e-53209
NC_019903:2806466:2828513282851328299791467Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,glycine cleavage system protein P2e-128459
NC_018515:3959681:3980132398013239815951464Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeglycine cleavage system protein P3e-131469
NC_016584:4961688:4985183498518349866431461Desulfosporosinus orientis DSM 765 chromosome, complete genomeglycine cleavage system protein P3e-131468
NC_012796:3600630:3600630360063036021441515Desulfovibrio magneticus RS-1, complete genomeglycine dehydrogenase [decarboxylating] subunit 20677
NC_011766:275673:2756732756732772381566Desulfurococcus kamchatkensis 1221n chromosome, complete genomeglycine dehydrogenase subunit 22e-92339
NC_015696:1853979:1874452187445218758971446Francisella sp. TX077308 chromosome, complete genomeglycine dehydrogenase (glycine cleavage system P2 protein)2e-109396
NC_007517:3524715:3547303354730335487481446Geobacter metallireducens GS-15, complete genomeglycine dehydrogenase subunit 21e-129463
NC_014973:595153:5951535951535965921440Geobacter sp. M18 chromosome, complete genomeclass V aminotransferase1e-130467
NC_014654:895298:9069259069259084991575Halanaerobium sp. 'sapolanicus' chromosome, complete genomeglycine dehydrogenase subunit 24e-64245
NC_002607:1178690:1192390119239011938111422Halobacterium sp. NRC-1, complete genomeglycine dehydrogenase subunit 29e-94344
NC_006512:2211654:2225397222539722282852889Idiomarina loihiensis L2TR, complete genomeglycine dehydrogenase7e-53208
NC_014815:5603000:5603122560312256059442823Micromonospora sp. L5 chromosome, complete genomeglycine dehydrogenase1e-57224
NC_013922:331847:3863153863153878141500Natrialba magadii ATCC 43099 chromosome, complete genomeaminotransferase class V3e-97355
NC_007484:2893878:2895433289543328968931461Nitrosococcus oceani ATCC 19707, complete genomeglycine dehydrogenase subunit 21e-116420
NC_015222:1843093:1860100186010018615541455Nitrosomonas sp. AL212 chromosome, complete genomeglycine cleavage system P-protein8e-119427
NC_015160:2295010:2298699229869923015842886Odoribacter splanchnicus DSM 20712 chromosome, complete genomeglycine dehydrogenase3e-52206
NC_010571:2423732:2423732242373224266112880Opitutus terrae PB90-1, complete genomeglycine dehydrogenase1e-53211
NC_012962:1317602:1317602131760213204782877Photorhabdus asymbiotica, complete genomedecarboxylating glycine dehydrogenase5e-53209
NC_014148:3368519:3368519336851933699941476Planctomyces limnophilus DSM 3776 chromosome, complete genomeGlycine dehydrogenase (decarboxylating)4e-106385
NC_019968:552440:5723715723715737711401Prevotella dentalis DSM 3688 chromosome 2, complete sequenceglycine cleavage system protein P6e-106384
NC_009656:2801885:2844266284426628471452880Pseudomonas aeruginosa PA7 chromosome, complete genomeglycine dehydrogenase9e-56218
NC_000868:1730820:1755983175598317574911509Pyrococcus abyssi GE5, complete genomeglycine dehydrogenase subunit 21e-122440
NC_003413:1847935:1847935184793518494431509Pyrococcus furiosus DSM 3638, complete genomeglycine dehydrogenase subunit 21e-121437
NC_000961:1727638:1732107173210717336151509Pyrococcus horikoshii OT3, complete genomeglycine dehydrogenase subunit 21e-124447
NC_015474:723553:7371457371457386531509Pyrococcus sp. NA2 chromosome, complete genomeglycine dehydrogenase subunit 25e-122438
NC_008269:428898:4367934367934383491557Rhodococcus sp. RHA1 plasmid pRHL1, complete sequenceglycine dehydrogenase (decarboxylating) subunit 25e-53208
NC_009953:2867864:2872789287278928756082820Salinispora arenicola CNS-205 chromosome, complete genomeglycine dehydrogenase1e-55217
NC_009380:2664419:2670757267075726735732817Salinispora tropica CNB-440 chromosome, complete genomeglycine dehydrogenase5e-55215
NC_008345:3756977:3767594376759437704822889Shewanella frigidimarina NCIMB 400, complete genomeglycine dehydrogenase7e-50198
NC_004347:791897:7935297935297964172889Shewanella oneidensis MR-1, complete genomeglycine dehydrogenase5e-52205
NC_009901:4028175:4042194404219440450822889Shewanella pealeana ATCC 700345, complete genomeglycine dehydrogenase3e-52206
NC_008577:4183361:4198244419824442011322889Shewanella sp. ANA-3 chromosome 1, complete sequenceglycine dehydrogenase5e-52206
NC_008321:3964414:3975744397574439786322889Shewanella sp. MR-4, complete genomeglycine dehydrogenase5e-51202
NC_008322:722612:7258677258677287552889Shewanella sp. MR-7, complete genomeglycine dehydrogenase3e-51203
NC_008750:807446:8105568105568134442889Shewanella sp. W3-18-1, complete genomeglycine dehydrogenase1e-52207
NC_019892:6645515:6645515664551566469841470Singulisphaera acidiphila DSM 18658 chromosome, complete genomeglycine cleavage system protein P7e-118424
NC_007793:1633080:1648783164878316502551473Staphylococcus aureus subsp. aureus USA300, complete genomeglycine dehydrogenase, subunit 22e-123442
NC_017275:1248875:1257347125734712588761530Sulfolobus islandicus HVE10/4 chromosome, complete genomeglycine dehydrogenase2e-104380
NC_012622:1194347:1216149121614912176781530Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeglycine dehydrogenase subunit 22e-104380
NC_008346:2251353:2258013225801322594731461Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeGlycine dehydrogenase (decarboxylating)1e-126453
NC_014804:189368:1933421933421948471506Thermococcus barophilus MP chromosome, complete genomeglycine dehydrogenase2e-124446
NC_015499:1167932:1185624118562411870571434Thermodesulfobium narugense DSM 14796 chromosome, complete genomearomatic amino acid beta-eliminating lyase/threonine aldolase2e-129462
NC_002689:309940:3099403099403113581419Thermoplasma volcanium GSS1, complete genomeglycine dehydrogenase subunit 26e-118424
NC_019940:1837863:1857710185771018591761467Thioflavicoccus mobilis 8321 chromosome, complete genomeglycine cleavage system protein P2e-109396
NC_014931:2511423:2531247253124725341712925Variovorax paradoxus EPS chromosome, complete genomeglycine dehydrogenase6e-52205
NC_015434:3581001:3600644360064436034662823Verrucosispora maris AB-18-032 chromosome, complete genomeglycine dehydrogenase2e-57223
NC_014966:795311:8105608105608134242865Vibrio vulnificus MO6-24/O chromosome II, complete sequenceglycine dehydrogenase (decarboxylating) (glycine cleavage system P protein)4e-52206