Pre_GI: BLASTP Hits

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Query: NC_011769:2294387:2300700 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 2300700, End: 2302052, Length: 1353

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013223:1090397:1125631112563111269441314Desulfohalobium retbaense DSM 5692, complete genomeRadical SAM domain protein1e-97357
NC_011296:102650:1117591117591130331275Thermodesulfovibrio yellowstonii DSM 11347, complete genomeradical SAM domain protein, putative1e-78294
NC_014972:1407632:1414288141428814155861299Desulfobulbus propionicus DSM 2032 chromosome, complete genomeRadical SAM domain-containing protein2e-70266
NC_018867:179975:2018922018922031721281Dehalobacter sp. CF chromosome, complete genomeRadical SAM domain protein5e-44179
NC_018866:108812:1342971342971355771281Dehalobacter sp. DCA chromosome, complete genomeRadical SAM domain protein5e-44179
NC_018866:108812:1296741296741309661293Dehalobacter sp. DCA chromosome, complete genomeradical SAM domain protein2e-39164
NC_018867:179975:1972691972691985611293Dehalobacter sp. CF chromosome, complete genomeradical SAM domain protein2e-39164
NC_018866:154252:1662431662431676131371Dehalobacter sp. DCA chromosome, complete genomeRadical SAM domain protein1e-34148
NC_003413:337963:3569873569873581201134Pyrococcus furiosus DSM 3638, complete genometungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying protein8e-1685.5
NC_014376:3732547:3742642374264237437451104Clostridium saccharolyticum WM1 chromosome, complete genomeRadical SAM domain protein2e-1377.8
NC_017278:1873934:188957118895711890548978Thermus sp. CCB_US3_UF1 chromosome, complete genomeMolybdenum cofactor biosynthesis protein A3e-1376.6
NC_014974:404015:406616406616407593978Thermus scotoductus SA-01 chromosome, complete genomemolybdenum cofactor biosynthesis protein A8e-1375.5
NC_018876:2380018:2394099239409923951541056Methanolobus psychrophilus R15 chromosome, complete genomeradical SAM family Fe-S protein3e-1170.1
NC_012470:1946968:1963790196379019649081119Streptococcus equi subsp. zooepidemicus, complete genomeRadical SAM superfamily protein5e-1169.7
NC_013730:296312:3186503186503196721023Spirosoma linguale DSM 74, complete genomeRadical SAM domain protein9e-1168.6
NC_019977:828427:8429508429508441071158Methanomethylovorans hollandica DSM 15978, complete genomeputative heme d1 biosynthesis radical SAM protein NirJ21e-1068.6
NC_020409:1407857:1419920141992014210651146Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein3e-1067
NC_003552:661579:6772296772296782781050Methanosarcina acetivorans C2A, complete genomeheme d1 biosynthesis protein NirJ1e-0965.1
NC_019940:3915500:3928323392832339302091887Thioflavicoccus mobilis 8321 chromosome, complete genomeFe-S oxidoreductase5e-0962.8
NC_010117:980313:992475992475993443969Coxiella burnetii RSA 331, complete genomeradical SAM domain protein9e-0962
NC_002971:780502:787314787314788282969Coxiella burnetii RSA 493, complete genomeradical SAM domain protein9e-0962
NC_015164:1877981:1890970189097018920491080Bacteroides salanitronis DSM 18170 chromosome, complete genomeRadical SAM domain-containing protein8e-0962
NC_013741:1390823:138988213898821390826945Archaeoglobus profundus DSM 5631, complete genomeRadical SAM domain protein8e-0962
NC_011528:647401:6550976550976561731077Coxiella burnetii CbuK_Q154, complete genomeradical SAM superfamily protein1e-0861.6
NC_015416:1039144:104021210402121041177966Methanosaeta concilii GP-6 chromosome, complete genomeradical SAM domain-containing protein4e-0859.7
NC_016885:809000:839460839460840449990Pyrobaculum oguniense TE7 chromosome, complete genomeputative Fe-S oxidoreductase5e-0859.7
NC_008609:3672653:3689549368954936906281080Pelobacter propionicus DSM 2379, complete genomeRadical SAM domain protein7e-0858.9
NC_011527:1113217:1125381112538111264571077Coxiella burnetii CbuG_Q212, complete genomeradical SAM superfamily protein9e-0858.5
NC_009376:794562:802228802228803223996Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeradical SAM domain-containing protein1e-0758.2
NC_015318:426707:449615449615450580966Hippea maritima DSM 10411 chromosome, complete genomemolybdenum cofactor biosynthesis protein A2e-0757.8
NC_007298:1824335:1828630182863018297571128Dechloromonas aromatica RCB, complete genomeCoenzyme PQQ biosynthesis protein E2e-0757.4
NC_008609:3672653:3693100369310036941161017Pelobacter propionicus DSM 2379, complete genomeRadical SAM domain protein3e-0757
NC_007643:1504758:152077315207731521765993Rhodospirillum rubrum ATCC 11170, complete genomeMolybdenum cofactor synthesis protein4e-0756.6
NC_020389:1777409:179374717937471794421675Methanosarcina mazei Tuc01, complete genomeRadical SAM domain heme biosynthesis protein4e-0756.6
NC_007626:68925:792337923380210978Magnetospirillum magneticum AMB-1, complete genomePredicted Fe-S oxidoreductase4e-0756.6
NC_010525:285805:2973692973692983761008Thermoproteus neutrophilus V24Sta, complete genomeRadical SAM domain protein5e-0756.2
NC_008825:2761499:2761499276149927627431245Methylibium petroleiphilum PM1, complete genomecoenzyme PQQ synthesis protein E8e-0755.5
NC_016783:429162:4394874394874405541068Corynebacterium diphtheriae INCA 402 chromosome, complete genomemolybdenum cofactor biosynthesis protein A1e-0655.1
NC_008609:3011059:301458630145863015584999Pelobacter propionicus DSM 2379, complete genomeRadical SAM domain protein2e-0654.7
NC_008209:1097607:1112322111232211134281107Roseobacter denitrificans OCh 114, complete genomecoenzyme PQQ biosynthesis protein E3e-0653.5
NC_007947:577315:582821582821583810990Methylobacillus flagellatus KT, complete genomemolybdenum cofactor synthesis-like protein4e-0653.1
NC_020409:1956485:1965095196509519664561362Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein6e-0652.4