Some Help

Query: NC_011769:2294387:2299000 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 2299000, End: 2300289, Length: 1290

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006510:1400000:1422127142212714234311305Geobacillus kaustophilus HTA426, complete genomeacetamidase/formamidase7e-147520
NC_014915:1331459:1352495135249513537991305Geobacillus sp. Y412MC52 chromosome, complete genomeAcetamidase/Formamidase1e-146520
NC_013411:2191514:2212551221255122138551305Geobacillus sp. Y412MC61, complete genomeAcetamidase/Formamidase1e-146520
NC_014010:1850500:1886004188600418873291326Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeAcetamidase/Formamidase2e-123442
NC_007492:6372900:6388266638826663895851320Pseudomonas fluorescens PfO-1, complete genomeAcetamidase/Formamidase1e-106387
NC_012883:1462000:1465020146502014663211302Thermococcus sibiricus MM 739, complete genomeAcetamidase/formamidase6e-101367
NC_014831:786011:7984027984027997191318Thermaerobacter marianensis DSM 12885 chromosome, complete genome1e-96353
NC_006396:912963:9292619292619305651305Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceputative acetamidase/formamidase1e-92340
NC_007503:1111457:1111457111145711125361080Carboxydothermus hydrogenoformans Z-2901, complete genome2e-85316
NC_012108:4417483:444520544452054445903699Desulfobacterium autotrophicum HRM2, complete genomeacetamidase/formamidase family protein8e-78291
NC_007503:1111457:111559011155901115847258Carboxydothermus hydrogenoformans Z-2901, complete genome2e-1273.9