Pre_GI: BLASTN Hits

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Query: NC_011750:156799 Escherichia coli IAI39 chromosome, complete genome

Start: 156799, End: 176019, Length: 19221

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli IAI39 is a serotype O7:K1 strain from a urinary tract infection. Isolated from the urine of a patient with pyelonephritis in the 1980s in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010473:118681*11868113863819958Escherichia coli str. K-12 substr. DH10B, complete genome022670BLASTN svgBLASTP svg
NC_000913:144577*14457716459920023Escherichia coli K12, complete genome022670BLASTN svgBLASTP svg
AC_000091:144577*14457716459920023Escherichia coli W3110 DNA, complete genome022670BLASTN svgBLASTP svg
NC_009801:143426*14342616609922674Escherichia coli E24377A, complete genome022510BLASTN svgBLASTP svg
AP010958:143358*14335816609922742Escherichia coli O103:H2 str. 12009 DNA, complete genome022500BLASTN svgBLASTP svg
CU928160:145276*14527616477719502Escherichia coli IAI1 chromosome, complete genome022420BLASTN svgBLASTP svg
CU928145:143755*14375516736523611Escherichia coli 55989 chromosome, complete genome022390BLASTN svgBLASTP svg
NC_011748:143755*14375516736523611Escherichia coli 55989, complete genome022390BLASTN svgBLASTP svg
CP002185:146389*14638916862022232Escherichia coli W, complete genome022360BLASTN svgBLASTP svg
CP002516:3949061*3949061396781618756Escherichia coli KO11, complete genome017100BLASTN svgBLASTP svg
NC_010498:153755*15375517756723813Escherichia coli SMS-3-5, complete genome015050BLASTN svgBLASTP svg
NC_007946:149733*14973317320823476Escherichia coli UTI89, complete genome013350BLASTN svgBLASTP svg
NC_008563:149709*14970917318423476Escherichia coli APEC O1, complete genome013350BLASTN svgBLASTP svg
NC_004431:153907*15390717771123805Escherichia coli CFT073, complete genome013300BLASTN svgBLASTP svg
NC_008253:149693*14969317261122919Escherichia coli 536, complete genome013220BLASTN svgBLASTP svg
NC_010468:3835259*3835259385816422906Escherichia coli ATCC 8739, complete genome012620BLASTN svgBLASTP svg
NC_011740:165363*16536318914823786Escherichia fergusonii ATCC 35469, complete genome03770BLASTN svgBLASTP svg
NC_011750:10940001094000111509921100Escherichia coli IAI39 chromosome, complete genome02601BLASTN svgBLASTP svg
NC_004431:32400032400034580421805Escherichia coli CFT073, complete genome02599BLASTN svgBLASTP svg
NC_004431:1211000*1211000123322222223Escherichia coli CFT073, complete genome02597BLASTN svgBLASTP svg
NC_004431:14016811401681142114919469Escherichia coli CFT073, complete genome02597BLASTN svgBLASTP svg
NC_011750:18495611849561187012520565Escherichia coli IAI39 chromosome, complete genome02597BLASTN svgBLASTP svg
NC_011750:19788011978801200896030160Escherichia coli IAI39 chromosome, complete genome02597BLASTN svgBLASTP svg
NC_011750:2585015*2585015261198826974Escherichia coli IAI39 chromosome, complete genome02597BLASTN svgBLASTP svg
NC_011750:2928990*2928990296940040411Escherichia coli IAI39 chromosome, complete genome02597BLASTN svgBLASTP svg
NC_011750:4947500*4947500496714419645Escherichia coli IAI39 chromosome, complete genome02597BLASTN svgBLASTP svg
NC_011750:49780004978000500028022281Escherichia coli IAI39 chromosome, complete genome02597BLASTN svgBLASTP svg
NC_011750:527470*52747055213724668Escherichia coli IAI39 chromosome, complete genome02597BLASTN svgBLASTP svg
NC_011750:5045927*5045927506827722351Escherichia coli IAI39 chromosome, complete genome02589BLASTN svgBLASTP svg
NC_011750:47757704775770480021124442Escherichia coli IAI39 chromosome, complete genome02567BLASTN svgBLASTP svg
NC_010660:175200*17520020478429585Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence02557BLASTN svgBLASTP svg
NC_011750:19313841931384195623124848Escherichia coli IAI39 chromosome, complete genome02514BLASTN svgBLASTP svg
NC_010660:33109331095109917991Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence02510BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome02484BLASTN svgBLASTP svg
NC_004337:309833*30983333864628814Shigella flexneri 2a str. 301, complete genome02460BLASTN svgBLASTP svg
NC_004431:4955658*4955658497950623849Escherichia coli CFT073, complete genome02401BLASTN svgBLASTP svg
NC_010660:864458644510942022976Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence02355BLASTN svgBLASTP svg
NC_007613:86408486408489531131228Shigella boydii Sb227, complete genome02335BLASTN svgBLASTP svg
NC_007613:15330241533024155939726374Shigella boydii Sb227, complete genome02335BLASTN svgBLASTP svg
NC_004741:310382*31038233778027399Shigella flexneri 2a str. 2457T, complete genome02333BLASTN svgBLASTP svg
NC_007613:44030704403070442929526226Shigella boydii Sb227, complete genome02303BLASTN svgBLASTP svg
NC_010498:22783062278306230147623171Escherichia coli SMS-3-5, complete genome02272BLASTN svgBLASTP svg
NC_007613:76123476123478018918956Shigella boydii Sb227, complete genome02252BLASTN svgBLASTP svg
AP010958:5090696*5090696512565934964Escherichia coli O103:H2 str. 12009 DNA, complete genome02242BLASTN svgBLASTP svg
AP010958:3474077*3474077351339539319Escherichia coli O103:H2 str. 12009 DNA, complete genome02208BLASTN svgBLASTP svg
NC_007384:37417083741708376309921392Shigella sonnei Ss046, complete genome02206BLASTN svgBLASTP svg
NC_002695:28939512893951291868324733Escherichia coli O157:H7 str. Sakai, complete genome02204BLASTN svgBLASTP svg
NC_002695:38522333852233387887626644Escherichia coli O157:H7 str. Sakai, complete genome02202BLASTN svgBLASTP svg
AP010958:37879913787991381070122711Escherichia coli O103:H2 str. 12009 DNA, complete genome02200BLASTN svgBLASTP svg
NC_002655:39195453919545394618926645Escherichia coli O157:H7 EDL933, complete genome02200BLASTN svgBLASTP svg
NC_002695:3468873*3468873351343744565Escherichia coli O157:H7 str. Sakai, complete genome02200BLASTN svgBLASTP svg
NC_010498:48560114856011487626620256Escherichia coli SMS-3-5, complete genome02200BLASTN svgBLASTP svg
AP010958:36695003669500372827458775Escherichia coli O103:H2 str. 12009 DNA, complete genome02185BLASTN svgBLASTP svg
NC_002655:3538656*3538656358072742072Escherichia coli O157:H7 EDL933, complete genome02159BLASTN svgBLASTP svg
NC_008258:1934479*1934479196306928591Shigella flexneri 5 str. 8401, complete genome02083BLASTN svgBLASTP svg
NC_008563:33321143332114335140519292Escherichia coli APEC O1, complete genome02074BLASTN svgBLASTP svg
AP010958:17116561711656173552123866Escherichia coli O103:H2 str. 12009 DNA, complete genome02074BLASTN svgBLASTP svg
NC_002695:14179121417912143730119390Escherichia coli O157:H7 str. Sakai, complete genome02070BLASTN svgBLASTP svg
NC_002655:11039911103991112782323833Escherichia coli O157:H7 EDL933, complete genome02066BLASTN svgBLASTP svg
NC_011751:34536833453683351238358701Escherichia coli UMN026 chromosome, complete genome02060BLASTN svgBLASTP svg
NC_004431:3409389*3409389349493685548Escherichia coli CFT073, complete genome02060BLASTN svgBLASTP svg
NC_007946:48759974875997491969643700Escherichia coli UTI89, complete genome02010BLASTN svgBLASTP svg
NC_008253:48178644817864486276044897Escherichia coli 536, complete genome01943BLASTN svgBLASTP svg
NC_011750:91995391995393907219120Escherichia coli IAI39 chromosome, complete genome01576BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome01520BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome01515BLASTN svgBLASTP svg
NC_007607:870008700012362836629Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence01398BLASTN svgBLASTP svg
NC_007941:11319113195659945281Escherichia coli UTI89 plasmid pUTI89, complete sequence01267BLASTN svgBLASTP svg
CU928145:3360967*3360967340151440548Escherichia coli 55989 chromosome, complete genome01235BLASTN svgBLASTP svg
NC_011748:3360967*3360967340151440548Escherichia coli 55989, complete genome01235BLASTN svgBLASTP svg
NC_002655:2142587*2142587216371121125Escherichia coli O157:H7 EDL933, complete genome01152BLASTN svgBLASTP svg
NC_011750:3545466*3545466356309917634Escherichia coli IAI39 chromosome, complete genome01021BLASTN svgBLASTP svg
AP010958:36273553627355365976432410Escherichia coli O103:H2 str. 12009 DNA, complete genome0898BLASTN svgBLASTP svg
NC_007608:970929709212311926028Shigella boydii Sb227 plasmid pSB4_227, complete sequence0749BLASTN svgBLASTP svg
NC_002655:27306592730659276187131213Escherichia coli O157:H7 EDL933, complete genome0644BLASTN svgBLASTP svg
NC_007414:56508565089199935492Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequence1e-134488BLASTN svgBLASTP svg
NC_013961:2861949*2861949288466722719Erwinia amylovora, complete genome6e-115422BLASTN svgBLASTP svg
CP002797:4812799*4812799483159918801Escherichia coli NA114, complete genome2e-111410BLASTN svgBLASTP svg
CU928159:30700*307004909918400Escherichia coli str. 55989 plasmid 55989p, complete genome6e-84319BLASTN svgBLASTP svg
NC_007606:4182188*4182188420162219435Shigella dysenteriae Sd197, complete genome6e-81309BLASTN svgBLASTP svg
NC_014107:17117017117019899927830Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,2e-71278BLASTN svgBLASTP svg
NC_004851:19170919170922249930791Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence1e-60242BLASTN svgBLASTP svg
NC_012779:12865001286500132459938100Edwardsiella ictaluri 93-146, complete genome2e-19105BLASTN svgBLASTP svg
NC_009788:16360163603711520756Escherichia coli E24377A plasmid pETEC_73, complete sequence7e-19103BLASTN svgBLASTP svg
NC_013508:18628961862896188607023175Edwardsiella tarda EIB202, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009832:19464011946401197178325383Serratia proteamaculans 568, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010694:96238396238398280120419Erwinia tasmaniensis, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011149:3863913*3863913388509921187Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-1075.8BLASTN svgBLASTP svg
NC_007712:26499402649940266759917660Sodalis glossinidius str. 'morsitans', complete genome2e-0971.9BLASTN svgBLASTP svg
NC_013508:876431*87643191551339083Edwardsiella tarda EIB202, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_007005:51543175154317518283828522Pseudomonas syringae pv. syringae B728a, complete genome2e-0661.9BLASTN svgBLASTP svg