Pre_GI: BLASTN Hits

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Query: NC_011748:3958572 Escherichia coli 55989, complete genome

Start: 3958572, End: 3979621, Length: 21050

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from the diarrheagenic stools of an HIV-positive adult suffering from persistent watery diarrhea in Central African Republic. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
CU928145:39585723958572397962121050Escherichia coli 55989 chromosome, complete genome040930BLASTN svgBLASTP svg
NC_009778:41880004188000423044042441Enterobacter sakazakii ATCC BAA-894, complete genome022440BLASTN svgBLASTP svg
NC_000913:3624826*3624826366560340778Escherichia coli K12, complete genome016260BLASTN svgBLASTP svg
AC_000091:39952333995233402122325991Escherichia coli W3110 DNA, complete genome016260BLASTN svgBLASTP svg
NC_010473:37225713722571375929536725Escherichia coli str. K-12 substr. DH10B, complete genome016250BLASTN svgBLASTP svg
CP002185:38224703822470385930636837Escherichia coli W, complete genome011070BLASTN svgBLASTP svg
NC_007384:38970003897000391653419535Shigella sonnei Ss046, complete genome010930BLASTN svgBLASTP svg
NC_004741:41605004160500418981229313Shigella flexneri 2a str. 2457T, complete genome010860BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome010860BLASTN svgBLASTP svg
NC_008258:35505003550500357858028081Shigella flexneri 5 str. 8401, complete genome010830BLASTN svgBLASTP svg
NC_011751:40745864074586409524320658Escherichia coli UMN026 chromosome, complete genome010560BLASTN svgBLASTP svg
NC_010498:38384193838419386683628418Escherichia coli SMS-3-5, complete genome010420BLASTN svgBLASTP svg
NC_007613:34703143470314350909338780Shigella boydii Sb227, complete genome08514BLASTN svgBLASTP svg
NC_010814:36739833673983369691022928Geobacter lovleyi SZ, complete genome3e-33151BLASTN svgBLASTP svg
NC_015733:5955467*5955467598799932533Pseudomonas putida S16 chromosome, complete genome1e-29139BLASTN svgBLASTP svg
NC_002947:61236086123608614375120144Pseudomonas putida KT2440, complete genome8e-28133BLASTN svgBLASTP svg
NC_007492:43108284310828433716726340Pseudomonas fluorescens PfO-1, complete genome8e-25123BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome1e-23119BLASTN svgBLASTP svg
NC_010501:5735656*5735656577333937684Pseudomonas putida W619, complete genome3e-21111BLASTN svgBLASTP svg
NC_009512:111886218862Pseudomonas putida F1, complete genome7e-19103BLASTN svgBLASTP svg
NC_010501:111882518825Pseudomonas putida W619, complete genome7e-19103BLASTN svgBLASTP svg
NC_007973:18217531821753184776126009Ralstonia metallidurans CH34 chromosome 1, complete sequence3e-18101BLASTN svgBLASTP svg
NC_015410:26985722698572274463646065Pseudomonas mendocina NK-01 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007484:16947381694738171826123524Nitrosococcus oceani ATCC 19707, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015277:93571*9357111870825138Sphingobacterium sp. 21 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_016026:1224129*1224129125391729789Micavibrio aeruginosavorus ARL-13 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015740:2692023*2692023271734525323Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_008782:15100001510000154094730948Acidovorax sp. JS42, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012691:2614603*26146032727599112997Tolumonas auensis DSM 9187, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018697:61883261883264338524554Cycloclasticus sp. P1 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014972:13718413718416221025027Desulfobulbus propionicus DSM 2032 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007964:21520002152000217413022131Nitrobacter hamburgensis X14, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010602:42028442028444011019827Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'2e-0661.9BLASTN svgBLASTP svg
NC_010842:42585442585444998024127Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosome2e-0661.9BLASTN svgBLASTP svg
NC_015422:28582282858228292680368576Alicycliphilus denitrificans K601 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_018868:61911361911367007150959Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_014315:28340002834000285616822169Nitrosococcus watsoni C-113 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_008782:13080071308007132716219156Acidovorax sp. JS42, complete genome1e-0560BLASTN svgBLASTP svg