Pre_GI: BLASTP Hits

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Query: NC_011748:4950723:4975373 Escherichia coli 55989, complete genome

Start: 4975373, End: 4976041, Length: 669

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from the diarrheagenic stools of an HIV-positive adult suffering from persistent watery diarrhea in Central African Republic. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011749:34056:427694276943437669Escherichia coli UMN026 plasmid p1ESCUM, complete sequencetranscriptionnal regulator involved in tetracycline resistance6e-128456
NC_010939:405477:415026415026415694669Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTransposon Tn10 tetC protein (ORFL)6e-128456
CU928145:4950723:497537349753734976041669Escherichia coli 55989 chromosome, complete genomeputative Transcriptional regulator6e-128456
NC_020418:448687:460184460184460777594Morganella morganii subsp. morganii KT, complete genomehypothetical protein3e-111400
NC_017328:1075535:110535211053521105945594Shigella flexneri 2002017 chromosome, complete genomeTransposon Tn10 tetC protein3e-111400
NC_016860:4055117:406238040623804062973594Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-111400
NC_003384:157158:177511177511177822312Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid1e-53209
NC_013365:92973:980169801698270255Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete4e-42171
NC_008595:1911491:192312819231281923763636Mycobacterium avium 104, complete genometranscriptional regulator, TetR family protein9e-1373.9
NC_008750:2332000:235360923536092354196588Shewanella sp. W3-18-1, complete genometranscriptional regulator, TetR family1e-0963.5
NC_009436:3807420:382089238208923821488597Enterobacter sp. 638, complete genomeTetR family transcriptional regulator2e-0962.4
NC_009668:1591290:159361715936171594213597Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceTetR family transcriptional regulator3e-0962
NC_020181:1653261:166443116644311665033603Enterobacter aerogenes EA1509E, complete genomeTranscriptional regulator, TetR family8e-0960.5
NC_009511:1781914:1791327179132717926011275Sphingomonas wittichii RW1 chromosome, complete genomeTetR family transcriptional regulator1e-0860.1
NC_009512:2108686:213674621367462137351606Pseudomonas putida F1, complete genometranscriptional regulator, TetR family2e-0859.7
NC_017986:4790482:483635748363574836962606Pseudomonas putida ND6 chromosome, complete genomeTetR family transcriptional regulator2e-0859.7
NC_015663:3742738:375320437532043753806603Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein6e-0857.8
NC_017161:1117741:112188511218851122460576Hydrogenobacter thermophilus TK-6 chromosome, complete genomeTetR family transcriptional regulator5e-0754.7
NC_013799:1117750:112189411218941122469576Hydrogenobacter thermophilus TK-6, complete genometranscriptional regulator, TetR family5e-0754.7
NC_016935:4367000:440472344047234405346624Paenibacillus mucilaginosus 3016 chromosome, complete genomeputative transcriptional regulator5e-0754.7
NC_016948:1796989:181936118193611819903543Mycobacterium intracellulare MOTT-64 chromosome, complete genomeTetR family transcriptional regulator1e-0653.1
NC_003030:3871658:389192338919233892513591Clostridium acetobutylicum ATCC 824, complete genomeTranscriptional regulator, AcrR family1e-0653.1
NC_013595:8553904:856484385648438565427585Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family1e-0653.1
NC_015690:2039215:206876320687632069362600Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTetR family transcriptional regulator4e-0651.6
NC_016935:2567039:261829326182932618892600Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator4e-0651.6
NC_009663:946285:955392955392955952561Sulfurovum sp. NBC37-1, complete genomeTetR family transcriptional regulator7e-0650.8
NC_011837:238160:243295243295243891597Clostridium kluyveri NBRC 12016, complete genomehypothetical protein9e-0650.4
NC_009706:238160:243295243295243891597Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator9e-0650.4
NC_015500:1204501:121396412139641214560597Treponema brennaborense DSM 12168 chromosome, complete genometranscriptional regulator, TetR family9e-0650.4