Pre_GI: BLASTP Hits

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Query: NC_011748:3958572:3972059 Escherichia coli 55989, complete genome

Start: 3972059, End: 3972439, Length: 381

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from the diarrheagenic stools of an HIV-positive adult suffering from persistent watery diarrhea in Central African Republic. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009778:4188000:421772842177284218108381Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-68256
CU928145:3958572:397205939720593972439381Escherichia coli 55989 chromosome, complete genomeCopper resistance protein C precursor3e-68256
NC_007492:4310828:431348043134804313854375Pseudomonas fluorescens PfO-1, complete genomeCopper resistance protein CopC1e-33141
NC_010682:1913941:192766019276601928046387Ralstonia pickettii 12J chromosome 1, complete sequencecopper resistance protein CopC2e-29127
NC_014640:1179382:119630811963081196694387Achromobacter xylosoxidans A8 chromosome, complete genomecopper resistance protein C3e-29127
NC_009659:1923925:195478119547811955158378Janthinobacterium sp. Marseille chromosome, complete genomecopper resistance signal peptide protein C2e-27121
NC_010170:4800000:484576348457634846149387Bordetella petrii, complete genomeCopper resistance protein C precursor.3e-27120
NC_009659:892272:897603897603897989387Janthinobacterium sp. Marseille chromosome, complete genomecopper resistance signal peptide protein C5e-27119
NC_009138:1518315:153877615387761539153378Herminiimonas arsenicoxydans, complete genomeCopper resistance protein C precursor CopC2e-26117
NC_012912:2553391:256453625645362564916381Dickeya zeae Ech1591, complete genomecopper resistance protein CopC2e-1477.8
NC_016147:586433:595473595473595856384Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative copper resistance protein8e-1372.4
NC_008258:1873805:188908818890881889462375Shigella flexneri 5 str. 8401, complete genomehypothetical protein2e-1271.2
NC_011083:1993672:201856320185632018937375Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,copper resistance protein CopC6e-1269.7
NC_011147:1057259:106120110612011061575375Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein7e-1269.3
NC_006511:1063249:106719110671911067565375Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative cation resistance protein7e-1269.3
NC_011205:1345511:134945313494531349827375Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein8e-1269.3
NC_016816:2073677:207678520767852077159375Pantoea ananatis LMG 5342, complete genomecopper resistance protein CopC9e-1268.9
NC_017046:1902788:192647319264731926853381Salmonella enterica subsp. enterica serovar Typhimurium str. 798cation resistance protein1e-1168.6
NC_016857:1903426:192711019271101927490381Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein1e-1168.6
NC_016810:1903426:192711019271101927490381Salmonella enterica subsp. enterica serovar Typhimurium strputative cation resistance protein1e-1168.6
NC_012125:1897611:190154519015451901925381Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-1168.6
NC_011294:1220526:122446212244621224842381Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-1168.6
NC_010102:1137247:114118911411891141563375Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-1168.6
NC_003197:1945858:196954219695421969916375Salmonella typhimurium LT2, complete genomeputative copper resistance protein1e-1168.6
NC_011094:1923870:194810319481031948477375Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-1168.6
NC_016856:1957263:198094719809471981321375Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-1168.6
NC_016860:1943203:196508319650831965457375Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-1168.6
NC_016863:1905454:192913819291381929512375Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein1e-1168.6
NC_011080:1944226:197516319751631975537375Salmonella enterica subsp. enterica serovar Newport str. SL254,copper resistance protein CopC1e-1168.6
NC_010634:2004653:201292620129262013312387Yersinia pseudotuberculosis PB1/+, complete genomecopper resistance protein CopC2e-1168.2
NC_010159:1668795:167639316763931676779387Yersinia pestis Angola, complete genomecopper resistance protein CopC2e-1168.2
NC_015566:2039431:204560720456072045990384Serratia sp. AS12 chromosome, complete genomecopper resistance protein CopC5e-1063.2
NC_015567:2039443:204561920456192046002384Serratia sp. AS9 chromosome, complete genomecopper resistance protein CopC5e-1063.2
NC_015061:3111211:313078431307843131167384Rahnella sp. Y9602 chromosome, complete genomecopper resistance protein CopC2e-0960.8
NC_011894:6708970:672760667276066727965360Methylobacterium nodulans ORS 2060, complete genomecopper resistance protein CopC4e-0960.1
NC_016818:3114460:313135231313523131735384Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completecopper resistance protein CopC-like protein4e-0960.1
NC_013850:1887556:189148518914851891859375Klebsiella variicola At-22 chromosome, complete genomecopper resistance protein CopC5e-0959.7
NC_010943:2465976:247047124704712470854384Stenotrophomonas maltophilia K279a, complete genomeputative copper resistance protein2e-0857.8
NC_010678:900389:932054932054932422369Ralstonia pickettii 12J chromosome 2, complete sequencecopper resistance protein CopC2e-0857.8
NC_016589:2824164:285857028585702858944375Burkholderia sp. YI23 chromosome 1, complete sequencecopper resistance protein CopC4e-0856.6
NC_008726:3947917:394904739490473949727681Mycobacterium vanbaalenii PYR-1, complete genomecopper resistance protein CopC6e-0856.2
NC_008344:2434344:244002124400212440452432Nitrosomonas eutropha C91, complete genomecopper resistance protein CopC3e-0753.9
NC_009338:2925286:296426129642612964950690Mycobacterium gilvum PYR-GCK chromosome, complete genomecopper resistance protein CopC2e-0651.2
NC_015186:2884866:289270228927022893070369Acidiphilium multivorum AIU301, complete genomeputative copper resistance protein5e-0650.1
NC_009806:35990:550915509155909819Kineococcus radiotolerans SRS30216 plasmid pKRAD01, completecopper resistance protein CopC5e-0649.7