Pre_GI: BLASTP Hits

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Query: NC_011748:3958572:3965159 Escherichia coli 55989, complete genome

Start: 3965159, End: 3966244, Length: 1086

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from the diarrheagenic stools of an HIV-positive adult suffering from persistent watery diarrhea in Central African Republic. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
CU928145:3958572:3965159396515939662441086Escherichia coli 55989 chromosome, complete genomefragment of conserved hypothetical protein (part 1)0678
NC_016822:3923908:3931081393108139326881608Shigella sonnei 53G, complete genomehypothetical protein0676
NC_007384:3897000:3904253390425339058601608Shigella sonnei Ss046, complete genomehypothetical protein0676
NC_017328:3625000:3632213363221336339161704Shigella flexneri 2002017 chromosome, complete genomehypothetical protein4e-175613
NC_004741:4160500:4174918417491841761081191Shigella flexneri 2a str. 2457T, complete genome5e-175613
NC_004337:3590323:3597496359749635992711776Shigella flexneri 2a str. 301, complete genomehypothetical protein9e-175612
NC_008258:3550500:3557907355790735596821776Shigella flexneri 5 str. 8401, complete genomehypothetical protein1e-174612
CP002185:3822470:3828519382851938301081590Escherichia coli W, complete genome3e-168591
AC_000091:3995233:4005957400595740071951239Escherichia coli W3110 DNA, complete genomehypothetical protein8e-165580
NC_000913:3624826:3631243363124336324811239Escherichia coli K12, complete genomehypothetical protein8e-165580
NC_012967:3549880:3563540356354035651471608Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein1e-164579
NC_012947:248000:2760292760292776361608Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein1e-164579
NC_010473:3722571:3728620372862037302261607Escherichia coli str. K-12 substr. DH10B, complete genome1e-164578
NC_011751:4074586:4080635408063540823081674Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-163576
NC_010498:3838419:3844468384446838461201653Escherichia coli SMS-3-5, complete genomehypothetical protein2e-163575
NC_013941:4249871:4255920425592042575931674Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein7e-162570
NC_007613:3470314:3477052347705234780651014Shigella boydii Sb227, complete genomehypothetical protein2e-77290
NC_007384:3897000:3902369390236939039911623Shigella sonnei Ss046, complete genomehypothetical protein2e-35150
NC_016822:3923908:3929197392919739308191623Shigella sonnei 53G, complete genomehypothetical protein2e-35150
NC_013941:4249871:4254036425403642556581623Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-35149
NC_017328:3625000:3630329363032936319511623Shigella flexneri 2002017 chromosome, complete genomehypothetical protein6e-35148
NC_004337:3590323:3595612359561235972341623Shigella flexneri 2a str. 301, complete genomehypothetical protein6e-35148
NC_004741:4160500:4176769417676941783911623Shigella flexneri 2a str. 2457T, complete genomehypothetical protein6e-35148
NC_011748:3958572:3962737396273739640891353Escherichia coli 55989, complete genome1e-34147
CU928145:3958572:3962737396273739640891353Escherichia coli 55989 chromosome, complete genomefragment of conserved hypothetical protein (part 2)1e-34147
NC_012947:248000:2778982778982795201623Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein9e-35147
NC_012967:3549880:3561656356165635632781623Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein9e-35147
NC_010473:3722571:3726736372673637283581623Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein9e-35147
AC_000091:3995233:4007825400782540094471623Escherichia coli W3110 DNA, complete genomehypothetical protein9e-35147
NC_000913:3624826:3628991362899136306131623Escherichia coli K12, complete genomehypothetical protein9e-35147
NC_008258:3550500:3556023355602335576451623Shigella flexneri 5 str. 8401, complete genomehypothetical protein8e-35147
NC_011751:4074586:4078751407875140803731623Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-34146
CP002185:3822470:3826635382663538282571623Escherichia coli W, complete genomeconserved hypothetical protein4e-34145
NC_007613:3470314:3475777347577734767901014Shigella boydii Sb227, complete genomehypothetical protein1e-33144
NC_010498:3838419:3842584384258438442061623Escherichia coli SMS-3-5, complete genomehypothetical protein2e-33143