Pre_GI: BLASTP Hits

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Query: NC_011748:3196173:3217343 Escherichia coli 55989, complete genome

Start: 3217343, End: 3217735, Length: 393

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from the diarrheagenic stools of an HIV-positive adult suffering from persistent watery diarrhea in Central African Republic. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
AP010958:3474077:349524534952453495637393Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-65246
NC_011741:3030324:305149430514943051886393Escherichia coli IAI1 chromosome, complete genome4e-70262
NC_013353:3474077:349524534952453495637393Escherichia coli O103:H2 str. 12009, complete genome2e-65246
NC_013364:3552284:357345835734583573850393Escherichia coli O111:H- str. 11128, complete genome3e-64243
NC_009801:3175714:319688131968813197177297Escherichia coli E24377A, complete genome7e-46182
NC_013361:3867558:388872738887273889089363Escherichia coli O26:H11 str. 11368 chromosome, complete genome9e-60228
NC_002655:4653160:4684240468424046852771038Escherichia coli O157:H7 EDL933, complete genomeescU7e-0855.8
NC_002695:4584177:4615257461525746162941038Escherichia coli O157:H7 str. Sakai, complete genomeEscU7e-0855.8
NC_010694:2971170:2989733298973329908481116Erwinia tasmaniensis, complete genomeexport protein for peptides using the type III secretion system5e-2096.3
NC_010694:2138000:2153277215327721543861110Erwinia tasmaniensis, complete genomeexport protein for peptides using the type III secretion system3e-1787.4
NC_012214:2221702:2240691224069122417821092Erwinia pyrifoliae Ep1/96, complete genomeExport protein for peptides using the type III secretion system1e-1891.7
NC_015391:2059191:2075318207531820763851068Carnobacterium sp. 17-4 chromosome, complete genomeflagellar biosynthesis protein FlhB1e-0651.6
NC_021182:2883716:2896408289640828982371830Clostridium pasteurianum BC1, complete genomeflagellar biosynthetic protein FlhB/flagellar biosynthetic protein FliR3e-0960.5
CU928160:3030324:305149430514943051886393Escherichia coli IAI1 chromosome, complete genomefragment of Surface presentation of antigens protein (part 2)4e-70262
CU928145:3196173:321734332173433217735393Escherichia coli 55989 chromosome, complete genomefragment of Surface presentation of antigens protein (part 3)4e-70262
NC_010102:2967464:2994515299451529955851071Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-38157
NC_009800:2995958:301951730195173019879363Escherichia coli HS, complete genomehypothetical protein2e-64243
NC_004344:26828:4092440924420811158Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein1e-0652
NC_013722:1689125:1725764172576417268401077Xanthomonas albilineans, complete genomeprobable xanthomonas secretion apparatus protein1e-2098.2
NC_012660:819381:8221118221118232081098Pseudomonas fluorescens SBW25 chromosome, complete genomeputative type III secretion protein4e-0650.1
NC_011415:3217796:323896532389653239357393Escherichia coli SE11 chromosome, complete genomeputative type III secretion protein2e-65246
NC_013941:4470932:4502761450276145037981038Escherichia coli O55:H7 str. CB9615 chromosome, complete genomesecretion system apparatus protein SsaU7e-0855.8
NC_013361:5319497:5337674533767453387111038Escherichia coli O26:H11 str. 11368 chromosome, complete genomesecretion system apparatus protein SsaU5e-0856.6
NC_011601:4096427:4129023412902341300601038Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomesecretion system apparatus protein SsaU7e-0855.8
NC_011353:4688000:4718361471836147193981038Escherichia coli O157:H7 str. EC4115 chromosome, complete genomesecretion system apparatus protein SsaU7e-0855.8
NC_013008:4643825:4674402467440246754391038Escherichia coli O157:H7 str. TW14359 chromosome, complete genomesecretion system apparatus protein SsaU7e-0855.8
NC_016831:2867766:2893457289345728945271071Salmonella enterica subsp. enterica serovar Gallinarum/pullorumsecretory protein (associated with virulence)3e-38157
NC_016832:2829767:2856689285668928577591071Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Surface presentation of antigens protein spaS3e-38157
NC_016863:2974333:3000023300002330010931071Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1surface presentation of antigens protein SpaS3e-38157
NC_011205:3050235:3075930307593030770001071Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853surface presentation of antigens protein SpaS3e-38157
NC_013961:1622616:1649345164934516504361092Erwinia amylovora, complete genomeSurface presentation of antigens protein SpaS2e-1684.3
NC_011353:3805819:3827232382723238283531122Escherichia coli O157:H7 str. EC4115 chromosome, complete genomesurface presentation of antigens protein SpaS2e-67253
NC_012125:2938519:2965444296544429665141071Salmonella enterica subsp. enterica serovar Paratyphi C strainsurface presentation of antigens protein SpaS3e-38157
NC_016856:3026426:3051770305177030528401071Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssurface presentation of antigens protein SpaS3e-38157
NC_011274:2881306:2906997290699729080671071Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91surface presentation of antigens protein SpaS3e-38157
NC_011080:2982346:3008037300803730091071071Salmonella enterica subsp. enterica serovar Newport str. SL254,surface presentation of antigens protein SpaS3e-38157
NC_013008:3761467:3781958378195837830791122Escherichia coli O157:H7 str. TW14359 chromosome, complete genomesurface presentation of antigens protein SpaS2e-67253
NC_016857:3028421:3054109305410930551791071Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74surface presentation of antigens protein SpaS3e-38157
NC_011294:2890500:2916193291619329172631071Salmonella enterica subsp. enterica serovar Enteritidis strsurface presentation of antigens protein SpaS3e-38157
NC_011751:3285646:3307071330707133081831113Escherichia coli UMN026 chromosome, complete genomesurface presentation of antigens protein SpaS1e-67254
NC_011147:2814664:2841605284160528426751071Salmonella enterica subsp. enterica serovar Paratyphi A strsurface presentation of antigens protein SpaS3e-38157
NC_016860:3029272:3054963305496330560331071Salmonella enterica subsp. enterica serovar Typhimurium strsurface presentation of antigens protein SpaS3e-38157
NC_011094:2913500:2938729293872929397991071Salmonella enterica subsp. enterica serovar Schwarzengrund strsurface presentation of antigens protein SpaS3e-38157
NC_013961:851044:8743148743148754291116Erwinia amylovora, complete genomeSurface presentation of antigens protein SpaS5e-2096.3
NC_013353:3669500:3705170370517037062071038Escherichia coli O103:H2 str. 12009, complete genomeT3SS structure protein EscU7e-0855.8
NC_013364:3701895:3746664374666437477011038Escherichia coli O111:H- str. 11128, complete genomeT3SS structure protein EscU7e-0855.8
AP010958:3669500:3705170370517037062071038Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS structure protein EscU7e-0855.8
NC_012962:1189021:1193517119351711945691053Photorhabdus asymbiotica, complete genometype iii secretion component protein sctu8e-1372.4
NC_005126:4423964:4439952443995244410071056Photorhabdus luminescens subsp. laumondii TTO1, complete genomeType III secretion component protein SctU6e-1476.3
CP002516:903241:915426915426915788363Escherichia coli KO11, complete genometype III secretion exporter3e-60229
NC_016902:903241:915426915426915788363Escherichia coli KO11FL chromosome, complete genometype III secretion exporter3e-60229
NC_009664:533021:5352985352985363801083Kineococcus radiotolerans SRS30216, complete genometype III secretion exporter1e-0652
NC_020418:14965:2647326473275221050Morganella morganii subsp. morganii KT, complete genomeType III secretion inner membrane protein3e-1167
NC_002655:3769643:3790140379014037912611122Escherichia coli O157:H7 EDL933, complete genometype III secretion protein2e-67253
NC_003198:2856596:2883533288353328846031071Salmonella enterica subsp. enterica serovar Typhi str. CT18,type III secretion protein3e-38157
NC_003919:457482:4774604774604785331074Xanthomonas axonopodis pv. citri str. 306, complete genometype III secretion protein8e-0752.4
NC_006511:2819128:2846069284606928471391071Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtype III secretion protein3e-38157
NC_004631:2842453:2869390286939028704601071Salmonella enterica subsp. enterica serovar Typhi Ty2, completetype III secretion protein3e-38157
NC_006905:2960260:2985061298506129861311071Salmonella enterica subsp. enterica serovar Choleraesuis strtype III secretion protein3e-38157
NC_003197:3005842:3031533303153330326031071Salmonella typhimurium LT2, complete genometype III secretion protein3e-38157
NC_002695:3702344:3722835372283537239561122Escherichia coli O157:H7 str. Sakai, complete genometype III secretion protein2e-67253
NC_011149:2912219:2940059294005929411291071Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion protein3e-38157
NC_009997:2699644:2702876270287627039251050Shewanella baltica OS195, complete genometype III secretion protein, YscU/HrpY family2e-0754.3
NC_016901:2661971:2662793266279326638421050Shewanella baltica OS678 chromosome, complete genometype III secretion protein, YscU/HrpY family2e-0754.3
NC_013971:2876733:2895871289587128969861116Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein5e-2096.3
NC_013971:1660144:1686866168686616879631098Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein2e-1684.3
NC_003902:1416000:1437138143713814382111074Xanthomonas campestris pv. campestris str. ATCC 33913, completetype III secretion system protein HrcU7e-0752.8
NC_017046:3027161:3052849305284930539191071Salmonella enterica subsp. enterica serovar Typhimurium str. 798type III secretion system secretory apparatus3e-38157
NC_016810:3028421:3054109305410930551791071Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system secretory apparatus3e-38157
NC_007645:3343815:3356886335688633579231038Hahella chejuensis KCTC 2396, complete genomeType III secretory pathway, component EscU4e-1063.5
NC_015761:2726000:2751132275113227522021071Salmonella bongori NCTC 12419, complete genomevirulence associated secretory protein3e-38156