Pre_GI: BLASTP Hits

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Query: NC_011748:3196173:3204688 Escherichia coli 55989, complete genome

Start: 3204688, End: 3205320, Length: 633

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from the diarrheagenic stools of an HIV-positive adult suffering from persistent watery diarrhea in Central African Republic. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
CU928145:3196173:320468832046883205320633Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; putative bipartite regulator domain1e-123442
NC_013941:3540420:354795335479533548645693Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-123440
NC_011415:3217796:322625132262513226943693Escherichia coli SE11 chromosome, complete genomehypothetical protein3e-123440
NC_009800:2995958:300579730057973006489693Escherichia coli HS, complete genomehypothetical protein3e-123440
NC_009801:3175714:318416931841693184861693Escherichia coli E24377A, complete genomehypothetical protein3e-123440
NC_011751:3285646:329416332941633294795633Escherichia coli UMN026 chromosome, complete genomehypothetical protein8e-123439
NC_010468:906957:932535932535933167633Escherichia coli ATCC 8739, complete genomehypothetical protein8e-123439
CP002185:3167738:317763731776373178269633Escherichia coli W, complete genomeconserved protein with bipartite regulator domain8e-123439
NC_011750:3407500:341607034160703416702633Escherichia coli IAI39 chromosome, complete genomehypothetical protein8e-123439
CP002516:903241:927808927808928440633Escherichia coli KO11, complete genomehypothetical protein8e-123439
CU928160:3030324:303883930388393039471633Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative bipartite regulator domain8e-123439
AP010958:3474077:348259234825923483224633Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved hypothetical protein8e-123439
NC_011741:3030324:303883930388393039471633Escherichia coli IAI1 chromosome, complete genomehypothetical protein8e-123439
NC_013353:3474077:348259234825923483224633Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein8e-123439
NC_016902:903241:927808927808928440633Escherichia coli KO11FL chromosome, complete genomehypothetical protein8e-123439
NC_007384:3151344:315979331597933160485693Shigella sonnei Ss046, complete genomehypothetical protein4e-123439
NC_016822:3282654:329259032925903293222633Shigella sonnei 53G, complete genomehypothetical protein1e-122438
NC_002695:3702344:370987737098773710569693Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-122437
NC_002655:3769643:377717637771763777868693Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-122437
AC_000091:2976293:298619229861922986824633Escherichia coli W3110 DNA, complete genomeconserved hypothetical protein with bipartite regulator domain6e-122436
NC_000913:2975659:298555829855582986190633Escherichia coli K12, complete genomeconserved protein with bipartite regulator domain6e-122436
NC_010473:3069529:307942830794283080060633Escherichia coli str. K-12 substr. DH10B, complete genomeconserved protein with bipartite regulator domain6e-122436
NC_012759:2862807:287270628727062873338633Escherichia coli BW2952 chromosome, complete genomehypothetical protein6e-122436
NC_013008:3761467:376906037690603769692633Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein5e-122436
NC_013361:3867558:387607338760733876705633Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein4e-122436
NC_013364:3552284:356080535608053561437633Escherichia coli O111:H- str. 11128, complete genomehypothetical protein4e-122436
NC_011353:3805819:381439738143973814966570Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-108391
NC_012125:3879917:388744638874463888063618Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-41169
NC_003198:3881221:389420538942053894822618Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein9e-42169
NC_016832:3858815:386849238684923869109618Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein9e-42169
NC_016863:3905875:391536839153683915985618Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein3e-41167
NC_016860:3964000:397696539769653977582618Salmonella enterica subsp. enterica serovar Typhimurium strRmbA3e-41167
NC_011149:3863913:387856438785643879181618Salmonella enterica subsp. enterica serovar Agona str. SL483,RmbA3e-41167
NC_016845:1407339:142032914203291420946618Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,RmbA1e-26119
NC_014837:1873020:187884418788441879476633Pantoea sp. At-9b chromosome, complete genomeresponse regulator receiver protein5e-26117
NC_016612:2902628:291720829172082917825618Klebsiella oxytoca KCTC 1686 chromosome, complete genomeresponse regulator receiver protein4e-25114
NC_016612:2902628:291034029103402910975636Klebsiella oxytoca KCTC 1686 chromosome, complete genomeLuxR family transcriptional regulator6e-23107
NC_014837:1873020:189961018996101900230621Pantoea sp. At-9b chromosome, complete genomeLuxR family transcriptional regulator4e-23107
NC_014562:1402863:141025514102551410869615Pantoea vagans C9-1 chromosome, complete genomeUncharacterized protein yqeH7e-21100
NC_016845:1407339:141340114134011414096696Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,LuxR family transcriptional regulator2e-2099
NC_012731:1088321:111392611139261114468543Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative regulator8e-1063.9
NC_010473:279948:285520285520286110591Escherichia coli str. K-12 substr. DH10B, complete genomepredicted regulator2e-0962
NC_000913:303719:309970309970310560591Escherichia coli K12, complete genomepredicted regulator2e-0962
AC_000091:303719:309970309970310560591Escherichia coli W3110 DNA, complete genomepredicted regulator2e-0962
NC_012947:3487392:350091235009123501454543Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeLuxR family transcriptional regulator2e-0962
NC_009800:349592:358203358203358793591Escherichia coli HS, complete genomefimbrillin MatA7e-0960.5
NC_011745:333061:346782346782347372591Escherichia coli ED1a chromosome, complete genomeputative transcriptional regulator9e-0960.5
NC_011751:348000:354411354411355001591Escherichia coli UMN026 chromosome, complete genomeputative transcriptional regulator2e-0859.3
NC_008253:334467:378039378039378581543Escherichia coli 536, complete genomehypothetical protein YkgK3e-0858.5
NC_010498:301000:327120327120327662543Escherichia coli SMS-3-5, complete genomefimbrillin MatA3e-0858.5
NC_011742:291237:310705310705311295591Escherichia coli S88 chromosome, complete genometranscriptional regulator4e-0858.2
NC_011601:273430:281184281184281774591Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeregulator4e-0858.2
NC_007946:289425:321340321340321930591Escherichia coli UTI89, complete genomehypothetical protein YkgK4e-0858.2
NC_004431:364000:385866385866386456591Escherichia coli CFT073, complete genomeHypothetical protein ykgK4e-0858.2
NC_008563:318993:322930322930323520591Escherichia coli APEC O1, complete genomehypothetical protein4e-0858.2
NC_013941:378555:384127384127384717591Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeMatA4e-0857.8