Pre_GI: BLASTP Hits

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Query: NC_011748:1408280:1425498 Escherichia coli 55989, complete genome

Start: 1425498, End: 1425573, Length: 76

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from the diarrheagenic stools of an HIV-positive adult suffering from persistent watery diarrhea in Central African Republic. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
CU928145:1408280:14254981425498142557376Escherichia coli 55989 chromosome, complete genometRNA-Met1e-0651.6
NC_010658:1933605:19562111956211195628676Shigella boydii CDC 3083-94, complete genometRNA-Met1e-0651.6
NC_002655:2142587:21465212146521214659676Escherichia coli O157:H7 EDL933, complete genometRNA-Ile1e-0651.6
NC_011748:1773642:17864011786401178647676Escherichia coli 55989, complete genometRNA-Met1e-0651.6
NC_008258:2045000:20614322061432206150776Shigella flexneri 5 str. 8401, complete genometRNA-Met1e-0651.6
NC_002695:1929215:19405681940568194064376Escherichia coli O157:H7 str. Sakai, complete genometRNA-Ile1e-0651.6
CU928145:1773642:17864011786401178647676Escherichia coli 55989 chromosome, complete genometRNA-Met1e-0651.6
NC_007384:1320287:13371571337157133723276Shigella sonnei Ss046, complete genometRNA-Met1e-0651.6
NC_008258:1934479:19376561937656193773176Shigella flexneri 5 str. 8401, complete genometRNA-Met5e-0650.1