Pre_GI: BLASTP Hits

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Query: NC_011747:115864:128405 Escherichia coli S88 plasmid pECOS88, complete sequence

Start: 128405, End: 128563, Length: 159

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015663:1:232992329923886588Enterobacter aerogenes KCTC 2190 chromosome, complete genomeInsK6e-1269.3
NC_016816:2684336:269327326932732693704432Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family1e-1168.6
NC_012731:1088321:109687210968721097576705Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeintegrase catalytic subunit2e-1168.2
NC_021066:460292:495200495200495904705Raoultella ornithinolytica B6, complete genometransposase IS3/IS911 family protein2e-1167.8
NC_012214:1212616:122560912256091226403795Erwinia pyrifoliae Ep1/96, complete genometransposase2e-1167.4
NC_008800:2806827:284691928469192847713795Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,IS1400 transposase B3e-1167.4
NC_014306:4106569:411499141149914115821831Erwinia billingiae Eb661, complete genomeIS1400 transposase B3e-1167.4
NC_014618:2705769:271340027134002714194795Enterobacter cloacae SCF1 chromosome, complete genomeintegrase catalytic subunit3e-1167
NC_012779:916000:922793922793923341549Edwardsiella ictaluri 93-146, complete genometransposase B5e-1166.6
NC_011205:2938356:295887829588782959501624Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853transposase B5e-1166.6
NC_011149:4677412:469011446901144690737624Salmonella enterica subsp. enterica serovar Agona str. SL483,transposase B5e-1166.6
NC_015061:3111211:312568231256823126476795Rahnella sp. Y9602 chromosome, complete genomeIntegrase catalytic region5e-1166.2
NC_017047:3174588:319028431902843191033750Rahnella aquatilis HX2 chromosome, complete genomeintegrase6e-1166.2
NC_013956:3273340:328775432877543288476723Pantoea ananatis LMG 20103 chromosome, complete genomeInsK1e-1065.5
NC_012731:2302974:231416923141692314939771Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeintegrase catalytic subunit1e-1065.5
NC_004431:2304280:231577523157752316254480Escherichia coli CFT073, complete genomeTransposase1e-1065.1
NC_020181:421941:431084431084431563480Enterobacter aerogenes EA1509E, complete genomeTransposase1e-1065.1
NC_007946:2155454:216694021669402167419480Escherichia coli UTI89, complete genomeputative transposase1e-1065.1
NC_009792:808332:817127817127817606480Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-1065.1
NC_008253:2056734:206825220682522068731480Escherichia coli 536, complete genomeIS1400 transposase B1e-1065.1
NC_011283:4966471:497804649780464978930885Klebsiella pneumoniae 342 chromosome, complete genomeIS3 family element, transposase orfB1e-1065.1
NC_016845:575123:594857594857595336480Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,IS3 family element, transposase orfB2e-1064.7
NC_014306:3006028:302531230253123025560249Erwinia billingiae Eb661, complete genomeIS1400 transposase B, probable fragment3e-0960.5
NC_012731:2974745:298299529829952983633639Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative IS1400 transposase B4e-0960.1
NC_011883:2680380:268804726880472688835789Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Integrase catalytic region7e-0959.3
NC_004547:1873390:190224819022481903087840Erwinia carotovora subsp. atroseptica SCRI1043, complete genometransposase1e-0858.5
NC_011883:2826000:283523728352372836025789Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Integrase catalytic region2e-0858.2
NC_011883:519308:523987523987524775789Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Integrase catalytic region2e-0858.2
NC_011883:303980:317570317570318358789Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Integrase catalytic region2e-0858.2
NC_011883:1478173:148560914856091486397789Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Integrase catalytic region2e-0857.4
NC_003198:331314:340209340209340913705Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-0856.6
NC_016832:2612809:263710026371002637381282Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,IS1400 transposase B9e-0855.5
NC_006511:2540500:256494625649462565227282Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein9e-0855.5
NC_012125:326909:335690335690335971282Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-0755.5
NC_006905:326517:335820335820336101282Salmonella enterica subsp. enterica serovar Choleraesuis strputative integrase core domain1e-0755.5
NC_010102:2762304:277584427758442776113270Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0755.1
NC_016816:792460:815871815871816140270Pantoea ananatis LMG 5342, complete genomeIS1400 transposase B1e-0755.1
NC_013956:3641368:364815836481583648631474Pantoea ananatis LMG 20103 chromosome, complete genomeInsK2e-0754.7
NC_011094:334267:342127342127342405279Salmonella enterica subsp. enterica serovar Schwarzengrund str2e-0754.7
NC_002937:2068117:208911920891192089943825Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeISD1, transposase OrfB2e-0754.7
NC_002937:614000:628675628675629499825Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeISD1, transposase OrfB2e-0754.7
NC_013173:1356526:136575713657571366569813Desulfomicrobium baculatum DSM 4028, complete genomeIntegrase catalytic region3e-0753.9
NC_013173:2507516:251949425194942520306813Desulfomicrobium baculatum DSM 4028, complete genomeIntegrase catalytic region3e-0753.9
NC_011205:329155:344803344803345081279Salmonella enterica subsp. enterica serovar Dublin str. CT_020218536e-0753.1
NC_011080:333121:345005345005345283279Salmonella enterica subsp. enterica serovar Newport str. SL254,6e-0753.1
NC_016831:2667561:268279026827902683071282Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-0753.1
NC_014355:2635500:264894626489462649191246Candidatus Nitrospira defluvii, complete genometransposase (fragment)5e-0753.1
NC_012796:2090000:209322320932232094044822Desulfovibrio magneticus RS-1, complete genomeputative transposase orfB5e-0753.1
NC_014910:1591003:159900915990091599821813Alicycliphilus denitrificans BC chromosome, complete genomeintegrase catalytic region protein8e-0752.4
NC_003919:3060484:307096830709683071789822Xanthomonas axonopodis pv. citri str. 306, complete genomeISxac4 transposase1e-0651.6
NC_016816:1912366:192039419203941920537144Pantoea ananatis LMG 5342, complete genomeIS1400 transposase B2e-0651.2
NC_007484:667879:683965683965684783819Nitrosococcus oceani ATCC 19707, complete genomeIntegrase, catalytic region3e-0650.4
NC_003919:2233000:224995522499552250263309Xanthomonas axonopodis pv. citri str. 306, complete genometransposase4e-0650.1
NC_013446:2130021:214907121490712149334264Comamonas testosteroni CNB-2, complete genomeIntegrase, catalytic region4e-0650.1
NC_016010:1822212:183048718304871831230744Xanthomonas axonopodis pv. citrumelo F1 chromosome, completetransposase6e-0649.7
NC_016010:1822212:184147018414701842213744Xanthomonas axonopodis pv. citrumelo F1 chromosome, completetransposase6e-0649.7
NC_007508:1221500:124584212458421246585744Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeISxcc1 transposase6e-0649.7
NC_007508:2072738:208671220867122087455744Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeISxcC1 transposase6e-0649.7
NC_007508:2072738:208202820820282082771744Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeISxcC1 transposase6e-0649.7
NC_016010:65949:769267692677669744Xanthomonas axonopodis pv. citrumelo F1 chromosome, completetransposase6e-0649.7
NC_007508:1517393:152768115276811528424744Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeISxcc1 transposase6e-0649.7
NC_016010:1169850:118207611820761182819744Xanthomonas axonopodis pv. citrumelo F1 chromosome, completetransposase6e-0649.7
NC_016010:637535:654689654689655432744Xanthomonas axonopodis pv. citrumelo F1 chromosome, completetransposase5e-0649.7
NC_016857:329849:340656340656340937282Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative integrase core domain protein8e-0649.3
NC_016860:332087:341179341179341460282Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein8e-0649.3
NC_016863:332060:341152341152341433282Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative integrase core domain protein8e-0649.3
NC_017046:329847:340654340654340935282Salmonella enterica subsp. enterica serovar Typhimurium str. 7988e-0649.3
NC_010170:5087742:509242850924285093243816Bordetella petrii, complete genomeprobable transposase7e-0649.3
NC_010170:4800000:489349348934934894308816Bordetella petrii, complete genomeprobable transposase7e-0649.3
NC_016856:332771:341863341863342144282Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein8e-0649.3