Pre_GI: BLASTP Hits

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Query: NC_011745:4862218:4881381 Escherichia coli ED1a chromosome, complete genome

Start: 4881381, End: 4881956, Length: 576

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated in the 2000s from the faeces of a healthy man in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004431:4955658:497176749717674972366600Escherichia coli CFT073, complete genomeProtein yjdC2e-109394
NC_013353:5090696:512006551200655120640576Escherichia coli O103:H2 str. 12009, complete genometranscriptional regulator4e-109393
CU928145:4792703:480830548083054808880576Escherichia coli 55989 chromosome, complete genomeputative transcriptional regulator4e-109393
AP010958:5090696:512006551200655120640576Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted transcriptional regulator4e-109393
NC_011748:4792703:480830548083054808880576Escherichia coli 55989, complete genomeputative transcriptional regulator4e-109393
NC_010067:3204682:320642232064223206997576Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-99360
NC_011205:4564645:457928345792834579858576Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853transcriptional regulator1e-97355
NC_011294:4409137:442206444220644422639576Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator1e-97355
NC_016810:4573172:458735145873514587926576Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator1e-97355
NC_016831:4367000:438011343801134380688576Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator1e-97355
NC_016856:4563435:457960145796014580176576Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator1e-97355
NC_016857:4573173:458735245873524587927576Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator1e-97355
NC_016860:4649274:466416446641644664739576Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator1e-97355
NC_016863:4513106:452720745272074527782576Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator1e-97355
NC_017046:4571833:458601245860124586587576Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator1e-97355
NC_003197:4551880:456677045667704567345576Salmonella typhimurium LT2, complete genomeputative regulatory protein1e-97355
NC_011274:4385039:439996843999684400543576Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator2e-97354
NC_011080:4543000:456617945661794566754576Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator, TetR family2e-97353
NC_011147:4297513:431219643121964312771576Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator3e-97353
NC_006905:4486433:450147145014714502046576Salmonella enterica subsp. enterica serovar Choleraesuis strputative bacterial regulatory protein, merR family3e-97353
NC_003198:4513900:454326445432644543839576Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator9e-97352
NC_015761:4188250:421535042153504215925576Salmonella bongori NCTC 12419, complete genometranscriptional regulator1e-95348
NC_015663:1902344:192662719266271927202576Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative transcriptional regulator3e-91333
NC_021066:3703725:370725837072583707833576Raoultella ornithinolytica B6, complete genometranscriptional regulator1e-87321
NC_014618:4312295:431734043173404317930591Enterobacter cloacae SCF1 chromosome, complete genomeregulatory protein TetR3e-87320
NC_013850:4993307:501941150194115020001591Klebsiella variicola At-22 chromosome, complete genomeputative transcriptional regulator, TetR family4e-86317
NC_004547:667988:690300690300690875576Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein6e-70263
NC_012917:569856:585106585106585681576Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeputative transcriptional regulator, TetR family2e-69261
NC_010159:741819:744834744834745409576Yersinia pestis Angola, complete genometranscriptional regulator, TetR family2e-68258
NC_005810:515744:530002530002530577576Yersinia pestis biovar Microtus str. 91001, complete genomeputative transcriptional regulator2e-68258
NC_010465:4222586:422502142250214225596576Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, TetR family2e-68258
NC_006155:456000:470551470551471126576Yersinia pseudotuberculosis IP 32953, complete genomeputative TetR-family regulatory protein2e-68258
NC_008149:3790897:379608237960823796657576Yersinia pestis Nepal516, complete genomeTetR-family regulatory protein2e-68258
NC_009381:4169353:417453841745384175113576Yersinia pestis Pestoides F chromosome, complete genomeputative transcriptional regulator2e-68258
NC_014029:331919:403186403186403761576Yersinia pestis Z176003 chromosome, complete genomeputative TetR-family regulatory protein2e-68258
NC_017154:331921:345365345365345940576Yersinia pestis D106004 chromosome, complete genomeputative TetR-family regulatory protein2e-68258
NC_017168:751078:756263756263756838576Yersinia pestis A1122 chromosome, complete genomeputative transcriptional regulator2e-68258
NC_017265:644384:647399647399647974576Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative transcriptional regulator2e-68258
NC_009832:426993:451519451519452109591Serratia proteamaculans 568, complete genometranscriptional regulator, TetR family7e-65246
NC_013961:3269368:327428032742803274876597Erwinia amylovora, complete genomeHTH-type transcriptional regulator yjdC1e-64245
NC_013592:577831:592254592254592829576Dickeya dadantii Ech586, complete genometranscriptional regulator, TetR family1e-62239
NC_012912:4012112:401569040156904016265576Dickeya zeae Ech1591, complete genometranscriptional regulator, TetR family4e-62237
NC_020211:379000:397545397545398120576Serratia marcescens WW4, complete genomeputative transcriptional regulator7e-61233
NC_012880:3982383:398589639858963986471576Dickeya dadantii Ech703, complete genometranscriptional regulator, TetR family1e-60231
NC_005126:4824500:483065248306524831245594Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein7e-58223
NC_013956:455000:466493466493467071579Pantoea ananatis LMG 20103 chromosome, complete genomeYjdC3e-57221
NC_007712:532500:546200546200546775576Sodalis glossinidius str. 'morsitans', complete genomeputative transcriptional regulator1e-56218
NC_010554:2789722:279282327928232793395573Proteus mirabilis HI4320, complete genomehypothetical protein2e-52205
NC_015947:2231493:225504722550472255616570Burkholderia sp. JV3 chromosome, complete genomeregulatory protein TetR1e-1272.8
NC_015968:2195645:222134322213432221918576Enterobacter asburiae LF7a chromosome, complete genomeregulatory protein TetR2e-1065.5
NC_012968:507988:525242525242525805564Methylotenera mobilis JLW8, complete genometranscriptional regulator, TetR family6e-1063.9
NC_009925:1184442:120783412078341208415582Acaryochloris marina MBIC11017, complete genometranscriptional regulator, TetR family2e-0858.9
NC_007508:5093365:510727451072745107843570Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transcriptional regulator, TetR family2e-0858.5
NC_014500:1862000:187730718773071877909603Dickeya dadantii 3937 chromosome, complete genomeTetR family transcriptional regulator1e-0756.2
NC_016641:3272500:328989932898993290471573Paenibacillus terrae HPL-003 chromosome, complete genomeTetR family transcriptional regulator4e-0754.7
NC_016935:3229500:323418232341823234751570Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator5e-0650.8
NC_015690:2674187:268368126836812684250570Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator5e-0650.8
NC_017186:7480714:749817374981737498775603Amycolatopsis mediterranei S699 chromosome, complete genomeTetR family transcriptional regulator6e-0650.8
NC_014318:7480669:749812874981287498730603Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator6e-0650.8
NC_013947:3406000:341000834100083410583576Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family7e-0650.4