Pre_GI: BLASTN Hits

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Query: NC_011742:3277941 Escherichia coli S88 chromosome, complete genome

Start: 3277941, End: 3305705, Length: 27765

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008563:33620583362058338959927542Escherichia coli APEC O1, complete genome033360BLASTN svgBLASTP svg
NC_011740:29865142986514300959323080Escherichia fergusonii ATCC 35469, complete genome08790BLASTN svgBLASTP svg
NC_004431:35131473513147354268029534Escherichia coli CFT073, complete genome011660BLASTN svgBLASTP svg
NC_010498:32913443291344332017728834Escherichia coli SMS-3-5, complete genome017330BLASTN svgBLASTP svg
NC_011751:35309543530954356883437881Escherichia coli UMN026 chromosome, complete genome021520BLASTN svgBLASTP svg
NC_008253:31613113161311320913747827Escherichia coli 536, complete genome021530BLASTN svgBLASTP svg
NC_011750:35840003584000361674032741Escherichia coli IAI39 chromosome, complete genome032550BLASTN svgBLASTP svg
NC_007946:32891513289151331659927449Escherichia coli UTI89, complete genome033230BLASTN svgBLASTP svg
NC_020260:32770073277007330315226146Cronobacter sakazakii Sp291, complete genome8e-38167BLASTN svgBLASTP svg
NC_009778:32876933287693330930421612Enterobacter sakazakii ATCC BAA-894, complete genome8e-38167BLASTN svgBLASTP svg
NC_013282:64656964656966558719019Cronobacter turicensis, complete genome5e-33151BLASTN svgBLASTP svg
NC_015061:1481500*1481500150744925950Rahnella sp. Y9602 chromosome, complete genome7e-26127BLASTN svgBLASTP svg
NC_018691:24107792410779243591125133Alcanivorax dieselolei B5 chromosome, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_015061:366552*36655238559319042Rahnella sp. Y9602 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_011748:23244952324495235493330439Escherichia coli 55989, complete genome5e-1177.8BLASTN svgBLASTP svg
CU928145:23244952324495235493330439Escherichia coli 55989 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_021066:46029246029251915858867Raoultella ornithinolytica B6, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020181:36050036050040550545006Enterobacter aerogenes EA1509E, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015663:49500004950000501991769918Enterobacter aerogenes KCTC 2190 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_013508:1289159*1289159133392244764Edwardsiella tarda EIB202, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008702:25205002520500255173231233Azoarcus sp. BH72, complete genome8e-0763.9BLASTN svgBLASTP svg