Pre_GI: BLASTN Hits

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Query: NC_011742:1528668 Escherichia coli S88 chromosome, complete genome

Start: 1528668, End: 1553315, Length: 24648

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020063:31040003104000312597921980Enterobacteriaceae bacterium strain FGI 57, complete genome0642BLASTN svgBLASTP svg
NC_004741:18230001823000184104318044Shigella flexneri 2a str. 2457T, complete genome07426BLASTN svgBLASTP svg
NC_004337:17836451783645180635922715Shigella flexneri 2a str. 301, complete genome07426BLASTN svgBLASTP svg
CP002797:15910001591000160930018301Escherichia coli NA114, complete genome05453BLASTN svgBLASTP svg
NC_010468:2406387*2406387242509318707Escherichia coli ATCC 8739, complete genome04337BLASTN svgBLASTP svg
NC_007606:15154031515403153810522703Shigella dysenteriae Sd197, complete genome02866BLASTN svgBLASTP svg
NC_008563:258725*25872528280524081Escherichia coli APEC O1, complete genome02674BLASTN svgBLASTP svg
NC_007946:25874725874728282624080Escherichia coli UTI89, complete genome02674BLASTN svgBLASTP svg
NC_008253:25705925705928215125093Escherichia coli 536, complete genome02539BLASTN svgBLASTP svg
NC_011751:25683025683028052023691Escherichia coli UMN026 chromosome, complete genome02264BLASTN svgBLASTP svg
NC_020063:20772332077233210134824116Enterobacteriaceae bacterium strain FGI 57, complete genome0856BLASTN svgBLASTP svg
NC_020063:33525163352516337629223777Enterobacteriaceae bacterium strain FGI 57, complete genome0805BLASTN svgBLASTP svg
NC_008258:17846371784637180559020954Shigella flexneri 5 str. 8401, complete genome07458BLASTN svgBLASTP svg
NC_011740:14947961494796152042525630Escherichia fergusonii ATCC 35469, complete genome08191BLASTN svgBLASTP svg
NC_007946:15866561586656161278726132Escherichia coli UTI89, complete genome027990BLASTN svgBLASTP svg
NC_008563:15778791577879160172323845Escherichia coli APEC O1, complete genome023440BLASTN svgBLASTP svg
NC_004431:17131411713141173884125701Escherichia coli CFT073, complete genome018180BLASTN svgBLASTP svg
NC_011751:17141311714131174129427164Escherichia coli UMN026 chromosome, complete genome017620BLASTN svgBLASTP svg
NC_011750:18099431809943183281122869Escherichia coli IAI39 chromosome, complete genome012670BLASTN svgBLASTP svg
NC_010498:17004471700447171902918583Escherichia coli SMS-3-5, complete genome012520BLASTN svgBLASTP svg
NC_010473:16076461607646163120923564Escherichia coli str. K-12 substr. DH10B, complete genome010040BLASTN svgBLASTP svg
NC_000913:15170511517051154061423564Escherichia coli K12, complete genome010040BLASTN svgBLASTP svg
AC_000091:15219761521976154430422329Escherichia coli W3110 DNA, complete genome010040BLASTN svgBLASTP svg
NC_002655:20150002015000203595420955Escherichia coli O157:H7 EDL933, complete genome09825BLASTN svgBLASTP svg
NC_007384:17378851737885176063922755Shigella sonnei Ss046, complete genome09650BLASTN svgBLASTP svg
NC_002695:20565452056545207693920395Escherichia coli O157:H7 str. Sakai, complete genome08558BLASTN svgBLASTP svg
NC_014837:31265433126543315305826516Pantoea sp. At-9b chromosome, complete genome3e-117430BLASTN svgBLASTP svg
NC_015968:2583721*2583721261035326633Enterobacter asburiae LF7a chromosome, complete genome3e-111410BLASTN svgBLASTP svg
NC_014562:2563466*2563466261248449019Pantoea vagans C9-1 chromosome, complete genome2e-93351BLASTN svgBLASTP svg
NC_020063:23438132343813236609922287Enterobacteriaceae bacterium strain FGI 57, complete genome3e-92347BLASTN svgBLASTP svg
NC_014500:26880952688095271328625192Dickeya dadantii 3937 chromosome, complete genome8e-84319BLASTN svgBLASTP svg
NC_013592:20591382059138209167632539Dickeya dadantii Ech586, complete genome4e-67264BLASTN svgBLASTP svg
NC_014532:21464662146466216923222767Halomonas elongata DSM 2581, complete genome4e-58234BLASTN svgBLASTP svg
NC_008321:26497812649781268071830938Shewanella sp. MR-4, complete genome3e-49204BLASTN svgBLASTP svg
NC_011751:68041768041770234121925Escherichia coli UMN026 chromosome, complete genome5e-48200BLASTN svgBLASTP svg
NC_008322:27166762716676274827431599Shewanella sp. MR-7, complete genome8e-47196BLASTN svgBLASTP svg
CU928160:25693225693227863921708Escherichia coli IAI1 chromosome, complete genome3e-46194BLASTN svgBLASTP svg
NC_007384:17633751763375178359920225Shigella sonnei Ss046, complete genome1e-45192BLASTN svgBLASTP svg
NC_002695:26123526123528377222538Escherichia coli O157:H7 str. Sakai, complete genome5e-45190BLASTN svgBLASTP svg
NC_002655:26123626123628140820173Escherichia coli O157:H7 EDL933, complete genome5e-45190BLASTN svgBLASTP svg
AP010958:60471960471962691322195Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-43184BLASTN svgBLASTP svg
CP002185:79473279473281843123700Escherichia coli W, complete genome3e-43184BLASTN svgBLASTP svg
NC_010468:32093263209326323524825923Escherichia coli ATCC 8739, complete genome3e-43184BLASTN svgBLASTP svg
NC_010658:10901041090104112159931496Shigella boydii CDC 3083-94, complete genome3e-43184BLASTN svgBLASTP svg
NC_013716:37084153708415373077822364Citrobacter rodentium ICC168, complete genome5e-42180BLASTN svgBLASTP svg
NC_007384:27881027881029760818799Shigella sonnei Ss046, complete genome7e-41176BLASTN svgBLASTP svg
AC_000091:39952333995233402122325991Escherichia coli W3110 DNA, complete genome7e-41176BLASTN svgBLASTP svg
NC_002516:4321000*4321000434209921100Pseudomonas aeruginosa PAO1, complete genome3e-40174BLASTN svgBLASTP svg
NC_011149:11106421110642113231521674Salmonella enterica subsp. enterica serovar Agona str. SL483,4e-36161BLASTN svgBLASTP svg
NC_016002:2825017*2825017284854323527Pseudogulbenkiania sp. NH8B, complete genome4e-33151BLASTN svgBLASTP svg
NC_013421:1954915*1954915197410019186Pectobacterium wasabiae WPP163, complete genome1e-27133BLASTN svgBLASTP svg
NC_002695:27693872769387279989230506Escherichia coli O157:H7 str. Sakai, complete genome4e-27131BLASTN svgBLASTP svg
NC_013166:14097901409790143362423835Kangiella koreensis DSM 16069, complete genome6e-26127BLASTN svgBLASTP svg
NC_015224:27019142701914272426222349Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-25125BLASTN svgBLASTP svg
NC_002655:28396002839600287010630507Escherichia coli O157:H7 EDL933, complete genome6e-23117BLASTN svgBLASTP svg
NC_014500:1066911*1066911109884731937Dickeya dadantii 3937 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_013508:275081*27508130064325563Edwardsiella tarda EIB202, complete genome5e-20107BLASTN svgBLASTP svg
NC_012779:261438*26143828632424887Edwardsiella ictaluri 93-146, complete genome3e-18101BLASTN svgBLASTP svg
NC_013592:956829*95682998781830990Dickeya dadantii Ech586, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004431:51233255123325514909025766Escherichia coli CFT073, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_014837:38786838786841433626469Pantoea sp. At-9b chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
AC_000091:43131674313167433668223516Escherichia coli W3110 DNA, complete genome2e-0765.9BLASTN svgBLASTP svg
CP002516:44312354431235445210920875Escherichia coli KO11, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_000913:43074714307471432826120791Escherichia coli K12, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002655:51948045194804521379718994Escherichia coli O157:H7 EDL933, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002695:51648195164819518468719869Escherichia coli O157:H7 str. Sakai, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008563:46560004656000467809922100Escherichia coli APEC O1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010473:44094924409492443038920898Escherichia coli str. K-12 substr. DH10B, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007384:45300004530000455031620317Shigella sonnei Ss046, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007384:16500*165004120424705Shigella sonnei Ss046, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007384:10860251086025111635930335Shigella sonnei Ss046, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004431:48676484867648489054022893Escherichia coli CFT073, complete genome7e-0763.9BLASTN svgBLASTP svg
CU928160:43951564395156441536720212Escherichia coli IAI1 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
CP002185:45661504566150459009923950Escherichia coli W, complete genome7e-0763.9BLASTN svgBLASTP svg
AP010958:50221965022196504082118626Escherichia coli O103:H2 str. 12009 DNA, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007613:41568414156841418149124651Shigella boydii Sb227, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007946:3855445*3855445387497119527Escherichia coli UTI89, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010468:43051054305105432709121987Escherichia coli ATCC 8739, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010468:3970995*3970995399406323069Escherichia coli ATCC 8739, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009801:46430004643000466340420405Escherichia coli E24377A, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009801:11921*119213399422074Escherichia coli E24377A, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009800:43322294332229435609923871Escherichia coli HS, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008563:3888232*3888232390776619535Escherichia coli APEC O1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008253:45419154541915456410622192Escherichia coli 536, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011149:31870223187022321200624985Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-0661.9BLASTN svgBLASTP svg
NC_007492:11936261193626121699723372Pseudomonas fluorescens PfO-1, complete genome3e-0661.9BLASTN svgBLASTP svg