Pre_GI: BLASTP Hits

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Query: NC_011742:4962008:4962008 Escherichia coli S88 chromosome, complete genome

Start: 4962008, End: 4963159, Length: 1152

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008563:5011997:5011997501199750131481152Escherichia coli APEC O1, complete genomeputative antirepressor0796
NC_011750:5045927:506195250619525062788837Escherichia coli IAI39 chromosome, complete genomeImmunity region from phage9e-85313
NC_012779:2184927:219903221990322199871840Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-77290
NC_009801:1419324:142227414222741423128855Escherichia coli E24377A, complete genomephage regulatory protein, Rha family7e-74278
NC_011415:2153243:215869521586952159360666Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-33144
NC_007712:1219957:123223012322301232988759Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein4e-32139
NC_009648:1541699:156721515672151567733519Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein5e-25115
NC_018080:5091772:511283951128395113681843Pseudomonas aeruginosa DK2 chromosome, complete genomeantirepressor9e-24111
NC_012914:1851102:186286418628641863493630Paenibacillus sp. JDR-2, complete genomephage regulatory protein, Rha family4e-23109
NC_012559:1888000:189513218951321895965834Laribacter hongkongensis HLHK9, complete genomehypothetical protein6e-23108
NC_012779:1939747:194867619486761949458783Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-22107
NC_011745:3245000:326114132611413261878738Escherichia coli ED1a chromosome, complete genomehypothetical protein4e-22105
NC_007712:1516589:152667515266751527457783Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein7e-22105
NC_012559:1497548:151113015111301511963834Laribacter hongkongensis HLHK9, complete genomehypothetical protein1e-21104
NC_009656:4527457:459262245926224593452831Pseudomonas aeruginosa PA7 chromosome, complete genomeputative antirepressor1e-21104
NC_002663:1988000:200009120000912000810720Pasteurella multocida subsp. multocida str. Pm70, complete genomehypothetical protein2e-21103
NC_009436:2776410:280935228093522809870519Enterobacter sp. 638, complete genomehypothetical protein7e-21102
NC_020272:2748733:279414927941492794877729Bacillus amyloliquefaciens IT-45, complete genomeProtein kilA8e-21101
NC_019842:1172944:117692511769251177584660Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,Protein kilA9e-21101
NC_013173:953633:977811977811978314504Desulfomicrobium baculatum DSM 4028, complete genomephage regulatory protein, Rha family7e-2098.6
NC_008570:2216736:224554922455492246283735Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomephage regulatory protein, Rha family8e-2098.2
NC_002937:2263763:227961722796172280495879Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeantirepressor, putative1e-1997.8
NC_010337:2848360:288696328869632887631669Heliobacterium modesticaldum Ice1, complete genomehypothetical protein7e-1995.1
NC_018704:1424728:143131814313181432010693Amphibacillus xylanus NBRC 15112, complete genomehypothetical protein3e-1893.2
NC_011146:3426500:345744234574423458137696Geobacter bemidjiensis Bem, complete genomephage regulatory protein, Rha family6e-1892
NC_012881:1802000:182705518270551827882828Desulfovibrio salexigens DSM 2638, complete genomephage regulatory protein, Rha family9e-1891.7
NC_007519:1782067:179362917936291794168540Desulfovibrio alaskensis G20 chromosome, complete genomephage-encoded protein-like2e-1790.9
NC_015519:2526047:253269625326962533364669Tepidanaerobacter sp. Re1 chromosome, complete genomephage regulatory protein, Rha family1e-1687.8
NC_013199:845000:847885847885848589705Lactobacillus rhamnosus Lc 705, complete genomephage protein, antirepressor protein1e-1687.8
NC_008525:780500:784187784187784912726Pediococcus pentosaceus ATCC 25745, complete genomePhage anti-repressor protein5e-1685.9
NC_011740:2072173:209951320995132100274762Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein from phage origin1e-1584.7
NC_016077:1388775:138877513887751389437663Acidaminococcus intestini RyC-MR95 chromosome, complete genomephage regulatory protein rha2e-1584
NC_007643:3799425:382213838221383822866729Rhodospirillum rubrum ATCC 11170, complete genomeUncharacterized phage-encoded protein-like2e-1583.6
NC_012108:1973861:199637619963761997080705Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein3e-1583.2
NC_009633:4097536:413600141360014136663663Alkaliphilus metalliredigens QYMF chromosome, complete genomeRha family phage regulatory protein3e-1583.2
NC_012988:4292815:434290443429044343815912Methylobacterium extorquens DM4, complete genomeantirepressor protein4e-1582.8
NC_017059:1972895:199250819925081993311804Rhodospirillum photometricum DSM 122, complete genomeUncharacterized phage-encoded protein-like5e-1582.4
NC_014624:1369642:139149313914931392305813Eubacterium limosum KIST612 chromosome, complete genomeantirepressor6e-1582
NC_013364:2898964:290672929067292907313585Escherichia coli O111:H- str. 11128, complete genomeputative antirepressor5e-1479.3
NC_009714:1404000:140507014050701405768699Campylobacter hominis ATCC BAA-381, complete genomephage anti-repressor protein2e-1377
NC_020207:1906803:191924619192461919971726Enterococcus faecium NRRL B-2354, complete genomeputative phage-encoded protein-like protein3e-1376.3
NC_007519:1782067:178976817897681790265498Desulfovibrio alaskensis G20 chromosome, complete genomephage-encoded protein-like5e-1375.5
NC_018866:1790564:180191918019191802644726Dehalobacter sp. DCA chromosome, complete genomephage regulatory protein, rha family1e-1274.3
NC_007519:2773000:279536727953672795585219Desulfovibrio alaskensis G20 chromosome, complete genomerha protein, phage phi-802e-1273.6
NC_011837:1935294:195284019528401953553714Clostridium kluyveri NBRC 12016, complete genomehypothetical protein4e-1272.8
NC_009706:2003194:202133720213372022050714Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein4e-1272.8
NC_009706:1935418:195300519530051953718714Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein4e-1272.8
NC_016810:2871689:289680228968022897353552Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein2e-1170.9
NC_007519:2773000:279055527905552791169615Desulfovibrio alaskensis G20 chromosome, complete genomephage-encoded protein-like3e-1170.1
NC_012563:2680246:269385026938502694623774Clostridium botulinum A2 str. Kyoto, complete genomeGp26 protein4e-1169.3
NC_007929:785875:786513786513786944432Lactobacillus salivarius subsp. salivarius UCC118, complete genomePhage antirepressor2e-1067
NC_003212:1713958:174305217430521743819768Listeria innocua Clip11262, complete genomehypothetical protein9e-1065.1
NC_003212:1248000:126543812654381266205768Listeria innocua Clip11262, complete genomehypothetical protein1e-0964.7
NC_013508:1687432:170541417054141706070657Edwardsiella tarda EIB202, complete genomeantirepressor protein2e-0860.5
NC_008309:1553399:158028215802821580668387Haemophilus somnus 129PT, complete genomepossible phage-related protein3e-0859.7
NC_014632:1112733:112580811258081126494687Ilyobacter polytropus DSM 2926 chromosome, complete genomephage regulatory protein, Rha family5e-0858.9
NC_009436:3367194:338105733810573381608552Enterobacter sp. 638, complete genomeCI repressor7e-0858.5
NC_014376:1472304:151515915151591515938780Clostridium saccharolyticum WM1 chromosome, complete genomephage regulatory protein, Rha family1e-0758.2
CP002797:2472908:247622824762282476623396Escherichia coli NA114, complete genomeputative phage protein2e-0757.4
NC_011083:2542876:255977325597732560168396Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,phage immunity repressor protein3e-0756.6
NC_016845:1285435:132252413225241323081558Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein4e-0756.2
NC_013592:2703327:270576327057632706277515Dickeya dadantii Ech586, complete genomehypothetical protein5e-0755.8
NC_017190:2130651:221174522117452212497753Bacillus amyloliquefaciens LL3 chromosome, complete genomeSPBc2 prophage-derived antirepressor protein yoqD8e-0755.1
NC_000964:2146000:219877621987762199531756Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-0654.7
NC_002655:301940:318447318447319004558Escherichia coli O157:H7 EDL933, complete genomeputative regulator encoded in prophage CP-933I2e-0654.3
NC_002695:301939:318446318446319003558Escherichia coli O157:H7 str. Sakai, complete genomeputative CI repressor2e-0654.3
NC_013008:306953:323638323638324195558Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeregulator encoded in prophage CP-933I2e-0654.3
NC_013411:597235:603153603153603932780Geobacillus sp. Y412MC61, complete genomephage regulatory protein, Rha family2e-0654.3
NC_014915:2963500:300000330000033000782780Geobacillus sp. Y412MC52 chromosome, complete genomephage regulatory protein, Rha family2e-0654.3
NC_013941:338121:359420359420359977558Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeCI repressor1e-0654.3
NC_016857:2871689:289697028969702897353384Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage immunity repressor protein2e-0653.5
NC_003198:4676536:469127346912734691656384Salmonella enterica subsp. enterica serovar Typhi str. CT18,phage immunity repressor protein2e-0653.5
NC_012779:2184927:219059521905952191080486Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-0653.5
NC_004631:4661000:467416246741624674545384Salmonella enterica subsp. enterica serovar Typhi Ty2, completephage immunity repressor protein2e-0653.5
NC_014500:2019113:204330220433022044042741Dickeya dadantii 3937 chromosome, complete genomeputative prophage protein3e-0653.5
NC_014121:1101093:111258111125811112976396Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephage immunity repressor protein4e-0652.8