Pre_GI: BLASTP Hits

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Query: NC_011742:3799788:3802980 Escherichia coli S88 chromosome, complete genome

Start: 3802980, End: 3804257, Length: 1278

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013895:1282566:1293495129349512945141020Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete2e-21103
NC_007511:719493:7333997333997346701272Burkholderia sp. 383 chromosome 2, complete sequenceABC branched chain amino acid family transporter, inner membrane subunit2e-86319
NC_015318:981989:996989996989997915927Hippea maritima DSM 10411 chromosome, complete genomeABC transporter integral membrane subunit3e-1480.1
NC_015318:1583839:158961515896151590490876Hippea maritima DSM 10411 chromosome, complete genomeABC transporter integral membrane subunit8e-1375.5
NC_015422:3836911:3838447383844738395231077Alicycliphilus denitrificans K601 chromosome, complete genomeABC transporter integral membrane subunit2e-31136
NC_015957:8103472:8103472810347281052261755Streptomyces violaceusniger Tu 4113 chromosome, complete genomeABC transporter integral membrane subunit9e-24111
NC_010172:3712000:3731947373194737337281782Methylobacterium extorquens PA1, complete genomeABC transporter related6e-1582.4
NC_010725:3992948:4015262401526240170431782Methylobacterium populi BJ001, complete genomeABC transporter related4e-1479.7
NC_013524:392089:4069004069004088221923Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeABC transporter related protein5e-1066.2
NC_014831:2133060:2170027217002721727202694Thermaerobacter marianensis DSM 12885 chromosome, complete genomeABC transporter related protein1e-1068.2
NC_008785:914411:9375709375709387391170Burkholderia mallei SAVP1 chromosome II, complete sequenceABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein4e-29129
NC_014837:1144500:1166422116642211688902469Pantoea sp. At-9b chromosome, complete genomeABC transporter-like protein3e-1170.1
NC_016147:3023180:304202330420233043000978Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeABC-type branched-chain amino acid transport system7e-1065.5
NC_007645:1245927:1263558126355812648531296Hahella chejuensis KCTC 2396, complete genomeABC-type branched-chain amino acid transport system, permease component7e-74278
NC_018581:3202281:320353832035383204527990Gordonia sp. KTR9 chromosome, complete genomeABC-type branched-chain amino acid transport system, permease component9e-0962
NC_012108:3824977:3828303382830338301771875Desulfobacterium autotrophicum HRM2, complete genomeABC-type branched-chain amino acid transport system, permease component2e-1790.9
NC_015499:119200:1449201449201459421023Thermodesulfobium narugense DSM 14796 chromosome, complete genomeABC-type transporter, integral membrane subunit3e-36153
NC_015275:566000:5688205688205698991080Clostridium lentocellum DSM 5427 chromosome, complete genomeABC-type transporter, integral membrane subunit9e-1788.2
NC_020291:6426704:644486264448626445827966Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeamino acid/amide ABC transporter membrane protein 2, HAAT family4e-1892.8
NC_014831:786011:7909667909667921111146Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter membrane protein 2, HAAT family5e-1582.4
NC_012988:4075429:4097873409787340996541782Methylobacterium extorquens DM4, complete genomebranched chain amino acid ABC transporter ATPase/permease5e-1479.3
NC_021177:1736854:1748293174829317501251833Streptomyces fulvissimus DSM 40593, complete genomeBranched chain amino acid transport permease2e-25117
NC_016633:1898234:1897221189722118982371017Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomebranched-chain amino acid ABC transporter permease2e-26120
NC_019897:2908971:2913408291340829151981791Thermobacillus composti KWC4 chromosome, complete genomebranched-chain amino acid ABC transporter permease8e-21101
NC_017192:1063955:106606210660621067027966Arcobacter sp. L, complete genomebranched-chain amino acid ABC transporter permease component8e-1375.5
NC_011297:787932:793781793781794773993Dictyoglomus thermophilum H-6-12, complete genomebranched-chain amino acid ABC transporter permease protein1e-1481.3
NC_003155:7453994:7473858747385874756331776Streptomyces avermitilis MA-4680, complete genomebranched-chain amino acid ABC transporter permease protein1e-21104
NC_010999:252605:268261268261269211951Lactobacillus casei, complete genomeBranched-chain amino acid ABC transporter, permease protein2e-1894
NC_005125:2811986:2850775285077528518841110Gloeobacter violaceus PCC 7421, complete genomebranched-chain amino acid transport protein BraE homolog4e-26119
NC_010805:575709:5970025970025981711170Burkholderia multivorans ATCC 17616 chromosome 2, completebranched-chain amino acid transport system permease protein8e-28125
NC_021066:1393750:1408936140893614102221287Raoultella ornithinolytica B6, complete genomeBranched-chain amino acid transport system permease protein LivM4e-60232
NC_003454:2080705:209843520984352099292858Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeBranched-chain amino acid transport system permease protein livM2e-1894.4
NC_013199:282901:299234299234300184951Lactobacillus rhamnosus Lc 705, complete genomehigh affinity branched-chain amino acid ABC transporter, permease component3e-1893.2
NC_007503:2010858:201490820149082015876969Carboxydothermus hydrogenoformans Z-2901, complete genomehigh affinity branched-chain amino acid ABC transporter, permease protein6e-1479
NC_013198:298000:317201317201318151951Lactobacillus rhamnosus GG, complete genomehigh affinity branched-chain amino acid ABC transporter, permease protein3e-1893.2
NC_002937:614000:6191546191546203771224Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehigh-affinity branched-chain amino acid ABC transporter, permease protein2e-46187
NC_005773:694990:6999396999397012521314Pseudomonas syringae pv. phaseolicola 1448A, complete genomehigh-affinity branched-chain amino acid ABC transporter, permease protein BraE4e-60232
NC_016906:3006748:3009121300912130103261206Gordonia polyisoprenivorans VH2 chromosome, complete genomehigh-affinity branched-chain amino acid transport system permease protein BraE9e-22105
NC_007946:3855445:3855445385544538567221278Escherichia coli UTI89, complete genomehigh-affinity branched-chain amino acid transport system permease protein livM9e-179626
NC_008061:428501:4431034431034443741272Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceinner-membrane translocator8e-86317
NC_015556:819503:8333088333088345821275Pseudomonas fulva 12-X chromosome, complete genomeinner-membrane translocator5e-62238
NC_008751:2774000:2792703279270327939261224Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeinner-membrane translocator2e-46187
NC_008786:3323167:3346604334660433476801077Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator2e-28127
NC_009255:1105786:1145385114538511465541170Burkholderia vietnamiensis G4 chromosome 2, complete sequenceinner-membrane translocator8e-28125
NC_016114:5539021:5560448556044855621781731Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeinner-membrane translocator4e-24112
NC_014098:3133440:3133440313344031344711032Bacillus tusciae DSM 2912 chromosome, complete genomeinner-membrane translocator6e-21102
NC_013740:15401:195671956720547981Acidaminococcus fermentans DSM 20731, complete genomeinner-membrane translocator5e-2099.4
NC_011979:3070110:307011030701103071072963Geobacter sp. FRC-32, complete genomeinner-membrane translocator5e-1892.8
NC_011768:79297:9729197291983641074Desulfatibacillum alkenivorans AK-01, complete genomeinner-membrane translocator4e-1686.3
NC_014830:3438504:3477396347739634784031008Intrasporangium calvum DSM 43043 chromosome, complete genomeinner-membrane translocator2e-1377.4
NC_007948:360199:371010371010371945936Polaromonas sp. JS666, complete genomeinner-membrane translocator1e-1068.2
NC_008786:5128363:514039451403945141326933Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator2e-0653.9
NC_008543:2035292:2035292203529220365631272Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceinner-membrane translocator8e-86317
NC_008705:3201817:3206705320670532079851281Mycobacterium sp. KMS, complete genomeinner-membrane translocator5e-22105
NC_015953:1581542:1595003159500315968021800Streptomyces sp. SirexAA-E chromosome, complete genomeinner-membrane translocator4e-2099.4
NC_009718:579291:5821335821335838211689Fervidobacterium nodosum Rt17-B1, complete genomeinner-membrane translocator2e-1480.5
NC_014844:2638994:2656306265630626575981293Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeinner-membrane translocator5e-44178
NC_010676:2658495:2678591267859126797601170Burkholderia phytofirmans PsJN chromosome 2, complete sequenceinner-membrane translocator1e-30134
NC_010086:1816378:1877133187713318783021170Burkholderia multivorans ATCC 17616 chromosome 2, completeinner-membrane translocator8e-28125
NC_013510:3324978:3332076333207633332571182Thermomonospora curvata DSM 43183, complete genomeinner-membrane translocator3e-24113
NC_010557:679656:6929566929566941251170Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceinner-membrane translocator2e-23110
NC_009617:3184924:3216396321639632174481053Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator2e-21103
NC_008786:4216152:423616342361634237110948Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator9e-1788.6
NC_008148:2053467:2056112205611220572691158Rubrobacter xylanophilus DSM 9941, complete genomeinner-membrane translocator1e-1584.3
NC_010424:697187:7023527023527033591008Candidatus Desulforudis audaxviator MP104C, complete genomeinner-membrane translocator1e-1171.6
NC_007298:2947200:296968429696842970646963Dechloromonas aromatica RCB, complete genomeinner-membrane translocator2e-1067
NC_014153:1663597:1675237167523716762711035Thiomonas intermedia K12 chromosome, complete genomeinner-membrane translocator6e-0962.4
NC_010552:2089140:2090611209061120918821272Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceinner-membrane translocator1e-86320
NC_010515:2358134:2374273237427323755441272Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceinner-membrane translocator9e-86317
NC_009436:2685910:2689212268921226905011290Enterobacter sp. 638, complete genomeinner-membrane translocator6e-62238
NC_012724:3222415:3243959324395932451311173Burkholderia glumae BGR1 chromosome 1, complete genomeInner-membrane translocator7e-28125
NC_012791:2233098:2246354224635422475501197Variovorax paradoxus S110 chromosome 1, complete genomeinner-membrane translocator4e-27122
NC_011060:2099255:210653921065392107402864Pelodictyon phaeoclathratiforme BU-1, complete genomeinner-membrane translocator5e-1685.9
NC_011661:961129:964640964640965623984Dictyoglomus turgidum DSM 6724, complete genomeinner-membrane translocator1e-1481.3
NC_013522:698114:721346721346722218873Thermanaerovibrio acidaminovorans DSM 6589, complete genomeinner-membrane translocator1e-0964.7
NC_014614:2295131:231127223112722312138867Clostridium sticklandii, complete genomeInner-membrane translocator precursor5e-1376.3
NC_015224:279037:2836292836292849151287Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,leucine/isoleucine/valine transporter permease subunit2e-140499
NC_011001:2517159:2517929251792925192001272Burkholderia cenocepacia J2315 chromosome 2, complete sequenceleucine/isoleucine/valine transporter permease subunit2e-85316
NC_008563:3888232:3888232388823238895091278Escherichia coli APEC O1, complete genomeleucine/isoleucine/valine transporter subunit LivM9e-179626
NC_008526:250000:268989268989269939951Lactobacillus casei ATCC 334, complete genomePredicted amino acid ABC-type transport system, permease component2e-1894
NC_010729:1462135:147325514732551474157903Porphyromonas gingivalis ATCC 33277, complete genomeprobable ABC transporter membrane protein4e-1272.8
NC_014334:267409:285830285830286780951Lactobacillus casei str. Zhang chromosome, complete genomeputative amino acid ABC transporter permease2e-1894
NC_015711:3085038:3109577310957731106411065Myxococcus fulvus HW-1 chromosome, complete genomeputative branched chain amino acid ABC transporter permease2e-1377
NC_016582:9422650:9440777944077794425161740Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative branched-chain amino acid ABC transporter permease4e-24112
NC_010572:6463939:6486413648641364882091797Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative branched-chain amino acid ABC transporter permease protein2e-20100
NC_008702:4064470:4088347408834740894441098Azoarcus sp. BH72, complete genomeputative branched-chain amino acid transport permease3e-32139
NC_012658:545840:548918548918549862945Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative high-affinity branched-chain amino acid ABC transporter permease2e-26120