Pre_GI: BLASTP Hits

Some Help

Query: NC_011742:3057444:3062479 Escherichia coli S88 chromosome, complete genome

Start: 3062479, End: 3062907, Length: 429

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007946:3125577:313061231306123131040429Escherichia coli UTI89, complete genomehypothetical protein3e-78289
NC_008253:2965573:297080029708002971228429Escherichia coli 536, complete genomehypothetical protein7e-77285
NC_009648:3476000:349658834965883497013426Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein2e-70264
NC_011283:942594:942594942594943019426Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion system lysozyme-like protein1e-69261
NC_014121:1822895:184423118442311844686456Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein1e-42171
NC_012962:4427000:443157544315754432009435Photorhabdus asymbiotica, complete genomehypothetical protein5e-42169
NC_011283:2103500:212274421227442123187444Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion system lysozyme-like protein4e-41166
NC_017060:125480:155976155976156407432Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion system lysozyme-like protein4e-41166
NC_016514:1627664:163883616388361639285450Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein3e-40163
NC_013971:465318:477848477848478300453Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein6e-40162
NC_013961:3269368:329308232930823293534453Erwinia amylovora, complete genomeCOG3518: putative type VI secretion system, core protein6e-40162
NC_009381:1655731:167642916764291676881453Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-39160
NC_009708:2788855:280954528095452809997453Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-39160
NC_014029:1760948:176258917625891763041453Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-39160
NC_017168:3948514:397053539705353970987453Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-39160
NC_017265:2557476:257949725794972579949453Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-39160
NC_010465:2820500:283999128399912840443453Yersinia pseudotuberculosis YPIII, complete genometype VI secretion system lysozyme-related protein2e-39160
NC_014837:3766426:378651337865133786953441Pantoea sp. At-9b chromosome, complete genometype VI secretion system lysozyme-like protein2e-38157
NC_010067:2488141:251155225115522512001450Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-36150
NC_010067:2488141:250595125059512506400450Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-35147
NC_009255:1250939:125408812540881254519432Burkholderia vietnamiensis G4 chromosome 2, complete sequenceGPW/gp25 family protein4e-24110
NC_016590:1183470:120992912099291210387459Burkholderia sp. YI23 chromosome 3, complete sequencehypothetical protein2e-24110
NC_009255:2044291:206250020625002062931432Burkholderia vietnamiensis G4 chromosome 2, complete sequenceGPW/gp25 family protein6e-24109
NC_004088:2937077:295909829590982959367270Yersinia pestis KIM, complete genomehypothetical protein1e-1375.1
NC_004088:2937077:295936029593602959551192Yersinia pestis KIM, complete genomehypothetical protein9e-1062.4
NC_010067:2488141:250890525089052509060156Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-0959.7
NC_004578:2797493:280968628096862810093408Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-0650.8