Pre_GI: BLASTP Hits

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Query: NC_011742:1574036:1592434 Escherichia coli S88 chromosome, complete genome

Start: 1592434, End: 1592700, Length: 267

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
CP002797:1591000:160540216054021605668267Escherichia coli NA114, complete genomeDNA-binding transcriptional regulator4e-44176
NC_008253:1534840:155222115522211552505285Escherichia coli 536, complete genomeHTH-type transcriptional regulator HipB2e-43174
CU928160:1579375:160242416024241602690267Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional regulator6e-43172
CP002516:2395578:240120724012072401473267Escherichia coli KO11, complete genomehelix-turn-helix domain protein6e-43172
CP002185:1681327:170437517043751704641267Escherichia coli W, complete genomeDNA-binding transcriptional regulator6e-43172
NC_011741:1579375:160242416024241602690267Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional regulator HipB6e-43172
NC_016902:2395578:240120724012072401473267Escherichia coli KO11FL chromosome, complete genomehelix-turn-helix domain-containing protein6e-43172
NC_009800:1589000:160899916089991609283285Escherichia coli HS, complete genometranscriptional regulator HipB1e-42171
NC_000913:1570431:159020015902001590466267Escherichia coli K12, complete genomeDNA-binding transcriptional regulator9e-43171
NC_010468:2345781:235142423514242351690267Escherichia coli ATCC 8739, complete genometranscriptional regulator, XRE family9e-43171
NC_010473:1661000:167982516798251680091267Escherichia coli str. K-12 substr. DH10B, complete genomeDNA-binding transcriptional regulator9e-43171
AC_000091:1574000:159389015938901594156267Escherichia coli W3110 DNA, complete genomeDNA-binding transcriptional regulator9e-43171
NC_012759:1462490:148225914822591482525267Escherichia coli BW2952 chromosome, complete genomeDNA-binding transcriptional regulator HipB9e-43171
NC_012947:2228235:223184422318442232110267Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeDNA-binding transcriptional regulator HipB9e-43171
NC_012967:1546000:156874315687431569009267Escherichia coli B str. REL606 chromosome, complete genomeDNA-binding transcriptional regulator HipB9e-43171
NC_020063:2230000:225540022554002255666267Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator7e-39159
NC_021066:1393750:141569014156901415962273Raoultella ornithinolytica B6, complete genomeantitoxin HipB8e-25112
NC_015566:547387:555059555059555307249Serratia sp. AS12 chromosome, complete genomehelix-turn-helix domain-containing protein7e-1062.4
NC_015567:547500:555245555245555493249Serratia sp. AS9 chromosome, complete genomehelix-turn-helix domain-containing protein7e-1062.4
NC_009648:5119271:513149151314915131757267Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative transcriptional regulator2e-0960.8
NC_009832:622969:629991629991630239249Serratia proteamaculans 568, complete genometranscriptional regulator, XRE family3e-0960.5
NC_016613:2103792:212089621208962121150255Vibrio sp. EJY3 chromosome 1, complete sequencetranscriptional regulator1e-0858.5
NC_004459:349500:362435362435362692258Vibrio vulnificus CMCP6 chromosome I, complete sequencePredicted transcriptional regulator2e-0858.2
NC_016901:414670:431096431096431377282Shewanella baltica OS678 chromosome, complete genomehelix-turn-helix domain-containing protein8e-0855.8
NC_009997:415808:432234432234432515282Shewanella baltica OS195, complete genomehelix-turn-helix domain protein8e-0855.8
NC_007954:334795:341656341656341937282Shewanella denitrificans OS217, complete genometransciptional regulator8e-0855.8
NC_014965:997344:102279310227931023032240Vibrio vulnificus MO6-24/O chromosome I, complete sequenceHipB protein3e-0753.9
NC_004459:2025436:203943420394342039673240Vibrio vulnificus CMCP6 chromosome I, complete sequencePredicted transcriptional regulator4e-0753.5
NC_014973:4174668:418025141802514180502252Geobacter sp. M18 chromosome, complete genomehelix-turn-helix domain-containing protein7e-0752.8