Pre_GI: BLASTP Hits

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Query: NC_011742:1574036:1576876 Escherichia coli S88 chromosome, complete genome

Start: 1576876, End: 1579248, Length: 2373

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009715:1470419:1474057147405714766362580Campylobacter curvus 525.92 chromosome, complete genomeputative TonB dependent receptor2e-70267
NC_008253:1534840:1537680153768015400522373Escherichia coli 536, complete genomehypothetical protein YddB01634
CU928145:1684777:1687617168761716899892373Escherichia coli 55989 chromosome, complete genomeputative porin protein01618
NC_011748:1684777:1687617168761716899892373Escherichia coli 55989, complete genomeputative porin protein01618
NC_008563:1620943:1623783162378316261552373Escherichia coli APEC O1, complete genomehypothetical protein01635
NC_010468:2345781:2366247236624723686192373Escherichia coli ATCC 8739, complete genomeTonB-dependent receptor plug01612
NC_012967:1546000:1549198154919815515702373Escherichia coli B str. REL606 chromosome, complete genomeputative porin protein01612
NC_012759:1462490:1465330146533014677022373Escherichia coli BW2952 chromosome, complete genomeputative porin protein01616
NC_004431:1754627:1760919176091917632912373Escherichia coli CFT073, complete genomeHypothetical protein yddB01634
NC_009801:1678790:1685083168508316874552373Escherichia coli E24377A, complete genomeTonB-dependent receptor01618
NC_009800:1589000:1592070159207015944422373Escherichia coli HS, complete genomeTonB-dependent receptor01614
CU928160:1579375:1582215158221515845872373Escherichia coli IAI1 chromosome, complete genomeputative porin protein01622
NC_011741:1579375:1582215158221515845872373Escherichia coli IAI1 chromosome, complete genomeputative porin protein01622
NC_011750:1849561:1852401185240118547732373Escherichia coli IAI39 chromosome, complete genomeputative porin protein01625
NC_000913:1570431:1573271157327115756432373Escherichia coli K12, complete genomepredicted porin protein01616
AP010958:1711656:1717949171794917203212373Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted porin protein01624
NC_013353:1711656:1717949171794917203212373Escherichia coli O103:H2 str. 12009, complete genomeporin protein01624
NC_013364:1902761:1909054190905419114262373Escherichia coli O111:H- str. 11128, complete genomeputative porin protein01621
NC_011601:1675000:1677893167789316802652373Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeporin01629
NC_011353:2004800:2011092201109220134642373Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeTonB-dependent receptor01623
NC_002695:2091890:2096491209649120988632373Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein01623
NC_013008:2007228:2010068201006820124402373Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeporin protein01623
NC_013361:2047170:2053463205346320558352373Escherichia coli O26:H11 str. 11368 chromosome, complete genomeporin01621
NC_013941:1894496:1900789190078919031612373Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeTonB-dependent receptor01623
NC_011415:1669484:1672324167232416746962373Escherichia coli SE11 chromosome, complete genomehypothetical protein01615
NC_010498:1659328:1674518167451816768902373Escherichia coli SMS-3-5, complete genomeTonB-dependent receptor01628
NC_010473:1661000:1663866166386616662382373Escherichia coli str. K-12 substr. DH10B, complete genomepredicted porin protein01616
NC_011751:1770376:1773216177321617755882373Escherichia coli UMN026 chromosome, complete genomeputative porin protein01634
NC_007946:1632025:1634865163486516372372373Escherichia coli UTI89, complete genomehypothetical protein YddB01635
CP002185:1681327:1684167168416716865392373Escherichia coli W, complete genomepredicted porin protein01615
AC_000091:1574000:1576961157696115793332373Escherichia coli W3110 DNA, complete genomepredicted porin protein01616
NC_011740:1595381:1608123160812316104952373Escherichia fergusonii ATCC 35469, complete genomeputative porin protein01447
NC_014664:1360524:1366684136668413695512868Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeTonB-dependent receptor5e-0963.5
NC_010658:1593137:1599430159943016018022373Shigella boydii CDC 3083-94, complete genomeTonB-dependent receptor01610
NC_007613:1533024:1549282154928215516542373Shigella boydii Sb227, complete genomehypothetical protein01608
NC_004741:1792442:1800872180087218032322361Shigella flexneri 2a str. 2457T, complete genomehypothetical protein01592
NC_008258:1750964:1763232176323217655922361Shigella flexneri 5 str. 8401, complete genomehypothetical protein01588
NC_016822:1781644:1794868179486817972402373Shigella sonnei 53G, complete genomehypothetical protein01610
NC_007384:1696831:1713349171334917157212373Shigella sonnei Ss046, complete genomehypothetical protein01610