Pre_GI: BLASTP Hits

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Query: NC_011741:3709081:3722351 Escherichia coli IAI1 chromosome, complete genome

Start: 3722351, End: 3722878, Length: 528

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from the faeces of a young healthy military conscript in the 1980s in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017328:3655876:367027936702793670806528Shigella flexneri 2002017 chromosome, complete genomeTranscriptional regulator gadE3e-97353
NC_009800:3685651:369967736996773700204528Escherichia coli HS, complete genometranscriptional regulator GadE3e-97353
AC_000091:3976888:398152239815223982049528Escherichia coli W3110 DNA, complete genomeDNA-binding transcriptional activator3e-97353
NC_008258:3581583:359568435956843596211528Shigella flexneri 5 str. 8401, complete genomehypothetical protein3e-97353
NC_000913:3624826:365638936563893656916528Escherichia coli K12, complete genomeDNA-binding transcriptional activator3e-97353
CP002185:3822470:385414538541453854672528Escherichia coli W, complete genomeDNA-binding transcriptional activator3e-97353
CP002516:246767:251401251401251928528Escherichia coli KO11, complete genomehypothetical protein3e-97353
NC_011748:3983432:402347440234744024001528Escherichia coli 55989, complete genomeDNA-binding transcriptional activator3e-97353
CU928160:3709081:372235137223513722878528Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional activator3e-97353
NC_004337:3590323:363542336354233635950528Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-97353
NC_004337:3621985:363542336354233635950528Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-97353
AP010958:4313462:432557643255764326103528Escherichia coli O103:H2 str. 12009 DNA, complete genomeDNA-binding transcriptional activator GadE3e-97353
CU928145:3983432:402347440234744024001528Escherichia coli 55989 chromosome, complete genomeDNA-binding transcriptional activator3e-97353
NC_010473:3722571:375413437541343754661528Escherichia coli str. K-12 substr. DH10B, complete genomeacid-induced positive regulator of glutamate-dependent acid resistance3e-97353
NC_007384:3741708:374634237463423746869528Shigella sonnei Ss046, complete genomehypothetical protein3e-97353
NC_016902:246767:251401251401251928528Escherichia coli KO11FL chromosome, complete genomehypothetical protein3e-97353
NC_016822:3946500:396240439624043962931528Shigella sonnei 53G, complete genomeDNA-binding transcriptional activator3e-97353
NC_013364:4306000:431785543178554318382528Escherichia coli O111:H- str. 11128, complete genomeDNA-binding transcriptional activator GadE3e-97353
NC_013361:4566779:457913545791354579662528Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional activator GadE3e-97353
NC_013353:4313462:432557643255764326103528Escherichia coli O103:H2 str. 12009, complete genomeDNA-binding transcriptional activator GadE3e-97353
NC_012967:3549880:358785735878573588384528Escherichia coli B str. REL606 chromosome, complete genomeDNA-binding transcriptional activator3e-97353
NC_012947:248000:252792252792253319528Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeLuxR family transcriptional regulator3e-97353
NC_012759:3529657:354488335448833545410528Escherichia coli BW2952 chromosome, complete genomeDNA-binding transcriptional activator3e-97353
NC_011415:3887997:390350839035083904035528Escherichia coli SE11 chromosome, complete genomehypothetical protein3e-97353
NC_004741:4132056:413789841378984138425528Shigella flexneri 2a str. 2457T, complete genomehypothetical protein3e-97353
NC_010468:231000:235762235762236289528Escherichia coli ATCC 8739, complete genometranscriptional regulator, LuxR family3e-97353
NC_009801:3956917:397017739701773970704528Escherichia coli E24377A, complete genometranscriptional regulator GadE3e-97353
NC_007613:3470314:350393235039323504459528Shigella boydii Sb227, complete genomehypothetical protein2e-96350
NC_010658:3622610:363616936361693636696528Shigella boydii CDC 3083-94, complete genometranscriptional regulator GadE2e-96350
NC_010498:3838419:386630638663063866836531Escherichia coli SMS-3-5, complete genometranscriptional regulator DctR4e-1167.8
NC_008258:3581583:359200235920023592532531Shigella flexneri 5 str. 8401, complete genomehypothetical protein3e-1167.8
NC_004337:3590323:363174136317413632271531Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-1167.8
NC_004337:3621985:363174136317413632271531Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-1167.8
NC_007384:3741708:375002237500223750552531Shigella sonnei Ss046, complete genomehypothetical protein3e-1167.8
NC_004741:4132056:414157741415774142107531Shigella flexneri 2a str. 2457T, complete genomehypothetical protein3e-1167.8
NC_013361:4566779:457545245754524575982531Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional regulator3e-1167.8
NC_013364:4306000:431417243141724314702531Escherichia coli O111:H- str. 11128, complete genomeputative DNA-binding transcriptional regulator3e-1167.8
NC_016822:3946500:395872139587213959251531Shigella sonnei 53G, complete genomeputative DNA-binding transcriptional regulator3e-1167.8
NC_017328:3655876:366659736665973667127531Shigella flexneri 2002017 chromosome, complete genomeHTH-type transcriptional regulator dctR3e-1167.8
AP010958:4313462:432189343218934322423531Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted DNA-binding transcriptional regulator6e-1167
CP002185:3822470:385046238504623850992531Escherichia coli W, complete genomepredicted DNA-binding transcriptional regulator6e-1167
CU928145:3983432:401979140197914020321531Escherichia coli 55989 chromosome, complete genomeputative DNA-binding transcriptional regulator6e-1167
CP002516:246767:255081255081255611531Escherichia coli KO11, complete genomeregulatory protein LuxR6e-1167
AC_000091:3976888:398520239852023985732531Escherichia coli W3110 DNA, complete genomepredicted DNA-binding ranscriptional regulator6e-1167
NC_000913:3624826:365270636527063653236531Escherichia coli K12, complete genomepredicted DNA-binding ranscriptional regulator6e-1167
NC_010473:3722571:375045137504513750981531Escherichia coli str. K-12 substr. DH10B, complete genomepredicted DNA-binding ranscriptional regulator6e-1167
NC_009800:3685651:369599436959943696524531Escherichia coli HS, complete genometranscriptional regulator DctR6e-1167
NC_011748:3983432:401979140197914020321531Escherichia coli 55989, complete genomeputative DNA-binding transcriptional regulator6e-1167
NC_009801:3956917:396649439664943967024531Escherichia coli E24377A, complete genometranscriptional regulator DctR6e-1167
CU928160:3709081:371866837186683719198531Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator6e-1167
NC_011415:3887997:389982538998253900355531Escherichia coli SE11 chromosome, complete genomeputative transcriptional regulator6e-1167
NC_016902:246767:255081255081255611531Escherichia coli KO11FL chromosome, complete genomeregulatory protein LuxR6e-1167
NC_013353:4313462:432189343218934322423531Escherichia coli O103:H2 str. 12009, complete genomeDNA-binding transcriptional regulator6e-1167
NC_012967:3549880:358417435841743584704531Escherichia coli B str. REL606 chromosome, complete genomeputative DNA-binding ranscriptional regulator6e-1167
NC_012947:248000:256472256472257002531Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeLuxR family transcriptional regulator6e-1167
NC_012759:3529657:354120035412003541730531Escherichia coli BW2952 chromosome, complete genomeputative DNA-binding ranscriptional regulator6e-1167
NC_011741:3709081:371866837186683719198531Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator6e-1167
NC_010468:231000:239442239442239972531Escherichia coli ATCC 8739, complete genometranscriptional regulator, LuxR family6e-1167
NC_010658:3622610:363248636324863633016531Shigella boydii CDC 3083-94, complete genometranscriptional regulator DctR7e-1166.6
NC_007613:3470314:350024935002493500779531Shigella boydii Sb227, complete genomehypothetical protein7e-1166.6