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Query: NC_011660:2839201 Listeria monocytogenes HCC23 chromosome, complete genome

Start: 2839201, End: 2862406, Length: 23206

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: Listeria monocytogenes HCC23 was isolated from channel catfish. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002973:27019832701983272478722805Listeria monocytogenes str. 4b F2365, complete genome015120BLASTN svgBLASTP svg
NC_003210:27495382749538277261223075Listeria monocytogenes EGD-e, complete genome012070BLASTN svgBLASTP svg
NC_003212:28373662837366286009922734Listeria innocua Clip11262, complete genome010500BLASTN svgBLASTP svg
NC_013891:26430852643085266609923015Listeria seeligeri serovar 1/2b str. SLCC3954, complete genome05473BLASTN svgBLASTP svg
NC_011146:3720658*3720658375266832011Geobacter bemidjiensis Bem, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015224:15147471514747154041825672Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-0869.9BLASTN svgBLASTP svg
CP002185:79473279473281843123700Escherichia coli W, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006270:14150011415001145819443194Bacillus licheniformis ATCC 14580, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_006322:14158631415863145905643194Bacillus licheniformis ATCC 14580, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_018704:2149229*2149229216937320145Amphibacillus xylanus NBRC 15112, complete genome3e-0661.9BLASTN svgBLASTP svg