Pre_GI: BLASTP Hits

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Query: NC_011660:366000:387013 Listeria monocytogenes HCC23 chromosome, complete genome

Start: 387013, End: 388236, Length: 1224

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: Listeria monocytogenes HCC23 was isolated from channel catfish. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003212:2293425:2292205229220522934281224Listeria innocua Clip11262, complete genomehypothetical protein9e-174609
NC_009454:1577319:1651588165158816528321245Pelotomaculum thermopropionicum SI, complete genomenitrate/nitrite transporter5e-61235
NC_014364:3286459:3299889329988933011301242Spirochaeta smaragdinae DSM 11293 chromosome, complete genomemajor facilitator superfamily MFS_14e-44179
NC_019908:323375:3376683376683389151248Brachyspira pilosicoli P43/6/78 chromosome, complete genomenitrate/nitrite transporter NarK2e-41170
NC_014330:313813:3198243198243210711248Brachyspira pilosicoli 95/1000 chromosome, complete genomenitrate/nitrite transporter, NarK2e-41170
NC_018604:1137797:1150821115082111520681248Brachyspira pilosicoli WesB complete genomenitrate/nitrite transporter, NarK4e-41169
NC_018607:1648607:1655114165511416563611248Brachyspira pilosicoli B2904 chromosome, complete genomenitrate/nitrite transporter NarK7e-41168
NC_014220:587826:6052766052766065111236Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomemajor facilitator superfamily MFS_11e-25117
NC_015573:1671000:1675445167544516766951251Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomemajor facilitator superfamily protein4e-23109
NC_008054:1502210:1519474151947415207091236Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative oxalate:formate antiporter9e-23108
NC_014219:2284000:2293925229392522951781254Bacillus selenitireducens MLS10 chromosome, complete genomemajor facilitator superfamily MFS_15e-23108
NC_008529:1514000:1536323153632315375191197Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completepermease of the major facilitator superfamily9e-22104
NC_011601:3951324:3964865396486539660671203Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransporter2e-20100
NC_013849:337350:3417973417973431821386Ferroglobus placidus DSM 10642 chromosome, complete genomemajor facilitator superfamily MFS_13e-2099.8
NC_002937:1233000:1254740125474012560141275Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completemajor facilitator superfamily protein1e-1997.8
NC_004337:3590323:3681863368186336830711209Shigella flexneri 2a str. 301, complete genomeputative resistance protein3e-1996.3
NC_011979:3112911:3112911311291131142061296Geobacter sp. FRC-32, complete genomemajor facilitator superfamily MFS_11e-1894.7
NC_002570:2649759:2649759264975926510181260Bacillus halodurans C-125, complete genomehypothetical protein1e-1894.4
NC_015968:204969:2093682093682105701203Enterobacter asburiae LF7a chromosome, complete genomeOxalate/Formate Antiporter2e-1894
NC_010080:1911932:1939253193925319405091257Lactobacillus helveticus DPC 4571, complete genomePermease4e-1789.4
NC_012988:2455807:2480364248036424820071644Methylobacterium extorquens DM4, complete genomemajor facilitator family transporter1e-1687.8
NC_010694:1250841:1253253125325312544821230Erwinia tasmaniensis, complete genomePutative resistance protein2e-1480.5
NC_009138:1843998:1845096184509618464061311Herminiimonas arsenicoxydans, complete genomehypothetical protein2e-1377.4
NC_010172:1079127:1126516112651611278081293Methylobacterium extorquens PA1, complete genomemajor facilitator superfamily MFS_15e-1375.9
NC_011757:1146608:1172926117292611742181293Methylobacterium chloromethanicum CM4, complete genomemajor facilitator superfamily MFS_15e-1375.9
NC_010725:1003760:1029105102910510303941290Methylobacterium populi BJ001, complete genomemajor facilitator superfamily MFS_11e-1274.7
NC_011894:3268850:3301520330152033031571638Methylobacterium nodulans ORS 2060, complete genomemajor facilitator superfamily MFS_14e-1272.8
NC_011757:5048714:5084312508431250856251314Methylobacterium chloromethanicum CM4, complete genomemajor facilitator superfamily MFS_13e-1169.7
NC_015138:4246787:4267362426736242690081647Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completemajor facilitator superfamily protein4e-1169.3
NC_010511:6756000:6761024676102467623371314Methylobacterium sp. 4-46 chromosome, complete genomemajor facilitator superfamily transporter5e-1169.3
NC_010725:3917369:3942037394203739436741638Methylobacterium populi BJ001, complete genomemajor facilitator superfamily MFS_12e-1067
NC_013173:953633:9862869862869874671182Desulfomicrobium baculatum DSM 4028, complete genomemajor facilitator superfamily MFS_14e-1066.2
NC_010511:4696868:4750276475027647515891314Methylobacterium sp. 4-46 chromosome, complete genomemajor facilitator superfamily transporter1e-0964.7
NC_012808:1979000:1996188199618819974051218Methylobacterium extorquens AM1, complete genomeputative oxalate/formate antiporter1e-0861.6
NC_016845:2691129:2707380270738027086781299Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,major facilitator superfamily protein1e-0861.2
NC_009648:1914621:1930853193085319321511299Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomemajor facilitator superfamily permease2e-0860.8
NC_012731:2650603:2666711266671126681321422Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative permease of the major facilitator superfamily3e-0859.7
NC_015566:3269469:3281506328150632827621257Serratia sp. AS12 chromosome, complete genomemajor facilitator superfamily protein4e-0859.3
NC_013158:1905643:1905643190564319068931251Halorhabdus utahensis DSM 12940, complete genomemajor facilitator superfamily MFS_11e-0758.2
NC_007644:1603696:1624610162461016259051296Moorella thermoacetica ATCC 39073, complete genomeMajor facilitator superfamily MFS_11e-0757.8
NC_008786:2687688:2698473269847327001431671Verminephrobacter eiseniae EF01-2, complete genomemajor facilitator superfamily MFS_12e-0653.9
NC_014391:3596812:3599697359969736011151419Micromonospora aurantiaca ATCC 27029 chromosome, complete genomemajor facilitator superfamily protein3e-0653.1
NC_014815:5603000:5620958562095856223761419Micromonospora sp. L5 chromosome, complete genomemajor facilitator superfamily mfs_11e-0551.6