Pre_GI: BLASTP Hits

Some Help

Query: NC_011660:366000:381000 Listeria monocytogenes HCC23 chromosome, complete genome

Start: 381000, End: 381563, Length: 564

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: Listeria monocytogenes HCC23 was isolated from channel catfish. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003212:2293425:229890822989082299471564Listeria innocua Clip11262, complete genomehypothetical protein2e-84311
NC_015690:1186545:126198612619861262594609Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator TetR1e-21102
UCMB5137:2054735:206797320679732068524552Bacillus atrophaeus UCMB-5137TetR family transcriptional regulator1e-1995.9
NC_003909:4333097:435421743542174354834618Bacillus cereus ATCC 10987, complete genometranscriptional regulator, TetR family1e-1685.9
NC_016641:5671186:567788656778865678542657Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator2e-1685.5
NC_004722:4496000:451605545160554516672618Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator, TetR family2e-1685.1
NC_011772:4487378:450169645016964502313618Bacillus cereus G9842, complete genometranscriptional regulator, TetR family4e-1684.3
NC_006274:4408734:442549344254934426110618Bacillus cereus E33L, complete genometranscriptional regulator, TetR family5e-1684
NC_014963:3942363:394772139477213948311591Terriglobus saanensis SP1PR4 chromosome, complete genomeregulatory protein TetR6e-1683.6
NC_009706:2925000:293888829388882939439552Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator7e-1580.1
NC_011837:2856500:287036328703632870941579Clostridium kluyveri NBRC 12016, complete genomehypothetical protein7e-1580.1
NC_017195:2498113:250271925027192503264546Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetranscriptional regulator, TetR family, putative1e-1479.7
NC_016047:637778:649228649228649773546Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeTetR family transcriptional regulator1e-1479.7
NC_013406:3975512:399704839970483997596549Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator2e-1478.6
NC_016048:2907702:298652729865272987111585Oscillibacter valericigenes Sjm18-20, complete genomeputative TetR family transcriptional regulator4e-1477.8
NC_016628:763833:784837784837785361525Vibrio furnissii NCTC 11218 chromosome 2, complete sequencetranscriptional regulator, TetR family5e-1477.4
NC_014960:115614:129255129255129923669Anaerolinea thermophila UNI-1, complete genomeTetR family transcriptional regulator1e-1376.3
NC_016935:3819500:384780138478013848349549Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator1e-1375.9
NC_014976:2735423:276082227608222761367546Bacillus subtilis BSn5 chromosome, complete genomeTetR family transcriptional regulator3e-1374.7
NC_013406:5066769:509420850942085094822615Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator7e-1373.6
NC_004193:3434015:345004134500413450640600Oceanobacillus iheyensis HTE831, complete genomehypothetical protein2e-1272.4
NC_014393:4352216:437911843791184379702585Clostridium cellulovorans 743B chromosome, complete genomeregulatory protein TetR2e-1168.9
NC_021175:2063611:208180320818032082324522Streptococcus oligofermentans AS 1.3089, complete genomeTetR/AcrR family transcriptional regulator9e-1166.6
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome1e-1066.2
NC_021184:2975975:299411229941122994678567Desulfotomaculum gibsoniae DSM 7213, complete genometranscriptional regulator2e-1065.9
NC_014622:3955851:397374539737453974257513Paenibacillus polymyxa SC2 chromosome, complete genometranscriptional regulator2e-1065.5
NC_015737:1441086:145719314571931457834642Clostridium sp. SY8519, complete genometranscriptional regulator3e-1064.7
NC_014169:2353711:237337023733702373939570Bifidobacterium longum subsp. longum JDM301 chromosome, completeTetR family transcriptional regulator3e-1064.7
NC_015172:1195782:120306212030621203688627Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometranscriptional regulator, TetR family6e-1063.9
NC_004193:375416:664955664955665572618Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator8e-1063.5
NC_010001:1702350:170682917068291707374546Clostridium phytofermentans ISDg, complete genometranscriptional regulator, TetR family9e-1063.2
NC_003909:1205605:122160112216011222146546Bacillus cereus ATCC 10987, complete genometranscriptional regulator, TetR family, putative2e-0962
NC_013406:3583474:359179335917933592398606Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator3e-0961.6
NC_015064:2421034:244783624478362448471636Acidobacterium sp. MP5ACTX9 chromosome, complete genomeregulatory protein TetR3e-0961.6
NC_020450:875757:880267880267880800534Lactococcus lactis subsp. lactis IO-1 DNA, complete genometranscription regulator5e-0960.8
NC_010376:1433247:147751714775171478062546Finegoldia magna ATCC 29328, complete genomeTetR/AcrR family transcriptional regulator6e-0960.5
NC_016048:1438721:146392114639211464499579Oscillibacter valericigenes Sjm18-20, complete genomeputative TetR family transcriptional regulator7e-0960.5
NC_004461:73390:913299132991874546Staphylococcus epidermidis ATCC 12228, complete genometranscriptional regulator tetR-family8e-0960.1
NC_010001:1702350:170326217032621703882621Clostridium phytofermentans ISDg, complete genometranscriptional regulator, TetR family1e-0859.3
NC_009142:5579563:560297856029785603583606Saccharopolyspora erythraea NRRL 2338, complete genomeTetR-family transcriptional regulator2e-0858.9
NC_016609:6177651:619097561909756191586612Niastella koreensis GR20-10 chromosome, complete genomeTetR family transcriptional regulator2e-0858.9
NC_017347:2724313:274572327457232746310588Staphylococcus aureus subsp. aureus T0131 chromosome, completeDNA-binding protein2e-0858.9
NC_020164:89214:911659116591725561Staphylococcus warneri SG1, complete genomehypothetical protein3e-0858.2
NC_015759:726612:745904745904746485582Weissella koreensis KACC 15510 chromosome, complete genomeTetR family transcriptional regulator2e-0755.8
NC_013790:756000:770737770737771246510Methanobrevibacter ruminantium M1 chromosome, complete genometranscriptional regulator TetR family2e-0755.8
NC_016935:4038265:406089840608984061497600Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator2e-0755.5
NC_015738:873653:877241877241877969729Eggerthella sp. YY7918, complete genomehypothetical protein3e-0754.7
NC_014334:99000:118851118851119456606Lactobacillus casei str. Zhang chromosome, complete genomeputative transcriptional regulator5e-0754.3
NC_018750:7653000:765570176557017656294594Streptomyces venezuelae ATCC 10712, complete genomeTetR-family transcriptional regulator8e-0753.5
NC_002973:505978:523644523644524204561Listeria monocytogenes str. 4b F2365, complete genomehypothetical protein1e-0653.1
NC_015600:1161640:116397211639721164547576Streptococcus pasteurianus ATCC 43144, complete genomeTetR family transcriptional regulator1e-0652.8
NC_013928:797714:811768811768812367600Streptococcus mutans NN2025, complete genometranscriptional regulator2e-0652
NC_014364:667841:686921686921687466546Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, TetR family2e-0652
NC_016641:3058571:307113930711393071465327Paenibacillus terrae HPL-003 chromosome, complete genomeTetR family transcriptional regulator3e-0651.6
NC_014171:1018338:103333510333351033889555Bacillus thuringiensis BMB171 chromosome, complete genomeTetR family transcriptional regulator3e-0651.2