Pre_GI: BLASTP Hits

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Query: NC_011660:2924397:2926317 Listeria monocytogenes HCC23 chromosome, complete genome

Start: 2926317, End: 2926793, Length: 477

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: Listeria monocytogenes HCC23 was isolated from channel catfish. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003212:57061:785057850578981477Listeria innocua Clip11262, complete genomehypothetical protein6e-38156
NC_003212:2413824:244192224419222442404483Listeria innocua Clip11262, complete genomehypothetical protein3e-32137
NC_008555:1204000:120970212097021210175474Listeria welshimeri serovar 6b str. SLCC5334, complete genomephage associated repressor, putative1e-1685.5
NC_020272:2692746:269463426946342694972339Bacillus amyloliquefaciens IT-45, complete genomeHTH-type transcriptional regulator1e-1065.5
NC_014538:2158131:218091821809182181331414Thermoanaerobacter sp. X513 chromosome, complete genomehelix-turn-helix domain-containing protein9e-1062.8
NC_009253:529494:536731536731537033303Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator3e-0960.8
NC_016052:842762:846086846086846415330Tetragenococcus halophilus NBRC 12172, complete genomeputative Xre family DNA-binding protein1e-0859.3
NC_000964:2146000:222025722202572220583327Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein3e-0857.8
NC_017068:2827568:284872528487252849108384Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative Xre family transcriptional regulator4e-0857
NC_009012:2927793:293408629340862934514429Clostridium thermocellum ATCC 27405, complete genometranscriptional regulator, XRE family8e-0856.2
NC_016935:7512884:752068375206837520877195Paenibacillus mucilaginosus 3016 chromosome, complete genomeXRE family transcriptional regulator2e-0755.1
NC_015690:7422911:743071274307127430906195Paenibacillus mucilaginosus KNP414 chromosome, complete genomeXRE family transcriptional regulator2e-0755.1
NC_013921:1915377:192814219281421928690549Thermoanaerobacter italicus Ab9 chromosome, complete genometranscriptional regulator, XRE family2e-0754.7
NC_015958:2174731:218947921894792190027549Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0754.7
NC_009617:1897887:190150219015021901873372Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0754.7
NC_014657:2127500:214037221403722140905534Caldicellulosiruptor owensensis OL chromosome, complete genomehelix-turn-helix domain protein4e-0753.9
NC_014976:684000:685892685892686242351Bacillus subtilis BSn5 chromosome, complete genomeputative Xre family transcriptional regulator5e-0753.5
NC_003212:1248000:124920512492051249633429Listeria innocua Clip11262, complete genomehypothetical protein6e-0753.1
NC_014551:576000:577723577723578103381Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein1e-0652.4
NC_013766:679906:683546683546683872327Listeria monocytogenes 08-5578 chromosome, complete genometranscriptional regulator1e-0652.4
NC_014964:35862:358623586236251390Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehelix-turn-helix domain-containing protein2e-0652
NC_010321:35855:358553585536244390Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeXRE family transcriptional regulator2e-0652
NC_012034:2555447:257988525798852580199315Anaerocellum thermophilum DSM 6725, complete genometranscriptional regulator, XRE family1e-0652
NC_011837:3272752:329170232917023292304603Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-0651.6
NC_009706:3341250:336020033602003360802603Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator2e-0651.6
NC_016894:3988180:400563340056334006028396Acetobacterium woodii DSM 1030 chromosome, complete genomeputative phage repressor3e-0650.8
NC_011898:2509267:251475425147542515374621Clostridium cellulolyticum H10, complete genometranscriptional regulator, XRE family3e-0650.8
NC_016791:2888319:289017028901702890790621Clostridium sp. BNL1100 chromosome, complete genomeresponse regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains4e-0650.4
NC_015913:117966:118288118288118545258Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomehypothetical protein4e-0650.4